| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_7012 |
|---|
| Symbol | |
|---|
| ID | 8670322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 7735757 |
|---|
| End bp | 7737784 |
|---|
| Gene Length | 2028 bp |
|---|
| Protein Length | 675 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003342455 |
|---|
| Protein GI | 271968259 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.342221 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.00752546 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGCGGTCG CCGCGGTGAC CGCGGCCACC CTCGGTCTCG GCGTCGTGCC CGGCGGCACG
GCACTCGCCG GCACGGGCGC GGCCGGCGCC TCGACTCCCG CCGCGACGCG CGCCGTTCCC
GTTGTGACGC GCGCCGCCCT CGACCCGTCG CTCGTCGCGG GCCGGGGCGC GGACGTCGGC
TTCGCCGAGC AGGAGGCGGA GAACGCCGCG ACGGACGGCA CGGTCATCGG CCCGGACCGC
TCCGCGTACA CGCTGCCGGC GGAGGCGTCC GGACGCAAGG CGGTCAAGCT GACGCCGGGG
CAGCACGTCG AGTTCACGCT GCCGGGCGCG GCCAACGCGA TCACCGTGCG CTACAGCATC
CCGGACGCGC CCGGCGGCGG CGGCATCACC GCGCCGCTCG GTGTCACGGT GAACGGCGGG
GGCAGGAAGA CCATGACCCT CACCTCGCAG TACTCGTGGC TGTACAACCA ATACCCGTTC
TCGAACGACC CGGACGCCGG GCTGCTGCAC CCCGAGTGGT GGATCACCGA GTGCGCCTGT
GTGCCCGCCA CCACGACGCC GCCCCCGGTG ATCACGACGC CGTTCCGCCC GAACCACTTC
TACGACGAGC AGCGCCTCCT GCTCGGCCGG ACCTACCGCG CGGGTGACAA GGTACGGCTC
ACGGTTCCCG CGGGGAGCAA CGCCGCGTGG ACGGTCATCG ACCTGCTCGA CTCGGAGCTC
GTCGGCCGGC CGCACGTCGA CCTCGTCGCG GCGAACGTGC TGGCGTTCGG CGCCGACCCG
TTCGGCAAGC GCGACTCCGC CGACGCGTTC GACAGGGCGA TCGCCTTCGC GCAGCGCAGG
CACCTCAACG TCTACATCCC GCCGGGCACG TACCAGGTGA ACCGCCACAT CATCGTCGAC
AACGTGACGA TCAGGGGTGC CGGCAGCTGG TACACGATCA TCAAGGGCCG CGAGGTCGCC
CTTCCCGTCC CGGCCCCCGA CGGCTCGGTC CACACCGGTG TCGGCTTCTA CGGCAAGGAC
GCGGCGGCCG GTGGCAGCAG GAACGTCCAC CTGTCCGGCT TCGCGATCGA GGGTGACGTC
CGCGAGCGCA TCGACACCGA CCAGGTGAAC GGGATCGGCG GGGCGATGAC CGACTCGACC
ATCGCCGGGC TCCACATCCG TCACACCAAG GTGGGCATGT GGTTCGACGG ACCCATGACG
AACCTGCGGA TCACGGACAA CGTCGTCGTC GACCAGATCG CCGACGCGCT CAACTTCCAC
ACCGGCGTCA CGAACTCGGT CGTGTCGAAC AACTTCGTCC GCAACACCGG CGACGACGGC
CTCGCCATGT GGTCCGAGAA GACCGCGAAC GCCAACAACA CCTTCGACCA CAACACCGTG
CAGACGCCGG TCCTCGCGAA CGGCATCGCC GTCTACGGGG GTACGGACAA CACCGTCTCG
AACAACCTCA TCGCCGACCC GATCCGTGAG GGCAGCGGCA TCCACGTCGG TTCCCGCTTC
GGCGCCGAGG CGTTCACCGG ACACCTGCGG ATCACCGGCA ACACCACGGT CCGCGCCGGC
ACCTACGAGC TGAACTGGAA AATCGGGCTG GGCGCCATCT GGTTCTACGC CCTGGACAAG
AACATCGACG CGGACATCCG GGTGGTCGGG AACGACTTCC TGGACAATAC CTACAACGCG
ATCATGCTGG TCAGCGACTG GCCGGTGAAG GACCTGTACT CGATCACGAA CGTCCATTTC
AAGGACATCA GGGTCGACGG CACGGGCACC TCGGTGGTCA GCGCCCGGGT GAAGGGGGGC
GCGTCCTTCG AGAACGTGGA CGCCCGCAAC GTCGGCGCGG TCGGCGTCAA CAACTGCGGG
TCGTTCAACT TCCCGTCCAC CGGCTCGGAA TTCTCGCTCA CGGACCTCGG AGGCAACGAC
GGGGGTGGCA CCACCGGGCC CTGGCTCGCC CCGTGGGAGC TGCCGAACAC CATCACCTGT
GATGACCGTC CCCCGGTCGT CGCGCCGCCG GCGCCGTCCC CGTGGTGA
|
|---|
| Protein sequence | MAVAAVTAAT LGLGVVPGGT ALAGTGAAGA STPAATRAVP VVTRAALDPS LVAGRGADVG
FAEQEAENAA TDGTVIGPDR SAYTLPAEAS GRKAVKLTPG QHVEFTLPGA ANAITVRYSI
PDAPGGGGIT APLGVTVNGG GRKTMTLTSQ YSWLYNQYPF SNDPDAGLLH PEWWITECAC
VPATTTPPPV ITTPFRPNHF YDEQRLLLGR TYRAGDKVRL TVPAGSNAAW TVIDLLDSEL
VGRPHVDLVA ANVLAFGADP FGKRDSADAF DRAIAFAQRR HLNVYIPPGT YQVNRHIIVD
NVTIRGAGSW YTIIKGREVA LPVPAPDGSV HTGVGFYGKD AAAGGSRNVH LSGFAIEGDV
RERIDTDQVN GIGGAMTDST IAGLHIRHTK VGMWFDGPMT NLRITDNVVV DQIADALNFH
TGVTNSVVSN NFVRNTGDDG LAMWSEKTAN ANNTFDHNTV QTPVLANGIA VYGGTDNTVS
NNLIADPIRE GSGIHVGSRF GAEAFTGHLR ITGNTTVRAG TYELNWKIGL GAIWFYALDK
NIDADIRVVG NDFLDNTYNA IMLVSDWPVK DLYSITNVHF KDIRVDGTGT SVVSARVKGG
ASFENVDARN VGAVGVNNCG SFNFPSTGSE FSLTDLGGND GGGTTGPWLA PWELPNTITC
DDRPPVVAPP APSPW
|
|---|
| |