Gene Sros_6739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6739 
Symbol 
ID8670048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7416426 
End bp7417673 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content71% 
IMG OID 
ProductABC transporter membrane spanning protein (xylose) 
Protein accessionYP_003342191 
Protein GI271967995 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.29906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCA CGATTTCCCC CGAGCGCAAG GCCGAGGCGC CCTCGATCAG CGCCAACGTC 
CGCGGTTACG CCGAGCGGGT GCGCGGTGGC GACATGGGCG CGCTGCCCGC CGTGTTCGGC
CTCGTCGTGC TCTGCACGGT CTTCGCCGTC CTGCGCCCCT CCTTCCTCAC CGCGGGCAAC
TTCGCCAACC TGCTCACCCA GGGCGCCGCG GTCACCGTGA TCGCCATGGG CCTGGTCTTC
GTGCTGCTCC TGGGCGAGAT CGACCTGTCG GCGGGCTTCG CCAGCGGTGT CTGCGCCTCG
ATCCTGGCGA TCCTGCTCAC CAACCAGGGT CTGCCCTGGT ACGTGGCGGT GGGCGCGGCC
ATCCTGGCCG GTGTGGTGAT CGGCGCCACG CTCGGCTCCA TCGTCACCAA ACTCGGCATC
CCCTCCTTCG TGGTGACGCT CGCCGCCTTC CTGGCCTTCC AGGGGCTCGT CCTCCTGCTG
ATCAAGGGTG GCACCATCAT CGCCATCCGC GACGAGACGA TCCTCGCCGT CGCCAACAAG
AACCTCCCGC CCGCGCTGGG CTGGGGGCTG CTGGTGGCCG GCGTCGCCGC CTACGCAGGG
CTGCAGCTGC TGCGGGCACG CAAGCGGGCC GTCCGGGGCC TGGCGTCCGA CCCGATCTCG
CTGATCGCGG TCCGGGTGGG GGCACTGGCA CTGCTCGGCG GGCTCGCGGT CTACTTCCTC
AACGTGGAGC GCAGCCGCAA CGCGGCGGTC GTCTCGCTCG CGGGCGTGCC GATCGTGGTG
CCGGTCATCG TGGTGCTCCT GCTGATCTGG ACGTTCGTGC TCCGCCGTAC CGCGTTCGGA
CGCCACCTCT ACGCGGTCGG CGGCAACGCC GAGGCCGCGC GGCGGGCGGG CATCAACGTC
GACCGGATGA AGATCAGCGC GTTCGTGATC TGCTCCTCCA TGGCCGCCGT CGGCGGCATC
ATCGCGGCGT CCCGGGCCAG CTCGGTCGAC CCCAACACCG GCGGCAGCAA CGTGCTGCTG
TACGCGGTGG GCGCCGCCGT CATCGGCGGG ACCAGTCTGT TCGGCGGCAA GGGCCGGGTG
CTGGACGCGA TCCTCGGCGG TACCGTGGTC GCGGTCATCG AAAACGGCAT GGGCCTGATG
GGCTACAGCT CCGGCGTGAA GTTCATGGTC ACCGGCTCGG TACTGCTGCT GGCCGCAGGG
GTGGACGCAC TGTCCCGCAA GCGGGCGGCC GCCACTGGTC TAAGGTGA
 
Protein sequence
MSATISPERK AEAPSISANV RGYAERVRGG DMGALPAVFG LVVLCTVFAV LRPSFLTAGN 
FANLLTQGAA VTVIAMGLVF VLLLGEIDLS AGFASGVCAS ILAILLTNQG LPWYVAVGAA
ILAGVVIGAT LGSIVTKLGI PSFVVTLAAF LAFQGLVLLL IKGGTIIAIR DETILAVANK
NLPPALGWGL LVAGVAAYAG LQLLRARKRA VRGLASDPIS LIAVRVGALA LLGGLAVYFL
NVERSRNAAV VSLAGVPIVV PVIVVLLLIW TFVLRRTAFG RHLYAVGGNA EAARRAGINV
DRMKISAFVI CSSMAAVGGI IAASRASSVD PNTGGSNVLL YAVGAAVIGG TSLFGGKGRV
LDAILGGTVV AVIENGMGLM GYSSGVKFMV TGSVLLLAAG VDALSRKRAA ATGLR