Gene Sros_6561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6561 
Symbol 
ID8669870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7221819 
End bp7223648 
Gene Length1830 bp 
Protein Length609 aa 
Translation table11 
GC content74% 
IMG OID 
ProductAMP-binding domain-containing protein 
Protein accessionYP_003342017 
Protein GI271967821 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0102107 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTTG TGGAGCGGGT GCGCGCGCAG GCCGACCGAT GTGGGCACGA ACGGTCGTAC 
ACCTTCGTGG AGGACCGCAG GGGCGAGCTC ACCGAGAGCC GCCTGACCTT CGCCGAGATC
GACACGCGGG CCCGGTCCAC GGGAGCATGG CTGGCCGGGC GGCGGGCGGC GGACCAGACG
GCGCTGCTGC TCTACCCCGC CGGACTGGAG TTCCTGACCG CCTTCCTCGG CTGCCTGTAC
TCCCGCGTGA TCGCGGTGCC CTCGCCGCTG CCGCAGACCG ACCCGCGCGC GCTGGAGCGG
GCGGAGGGGA TCATCAAGGA CGCCGACGTA CGGTTCGTGC TCACCGACTC GGCCAACCAG
GCCATGCTCA CCCGGTGGCT GCGCGACGTC GGCCTGGACG GCGCGGTCGA GTGCGTGGCC
ACCGACACCC TGGACCTGCC CGGCCCCGAC GAGTGGGCGA TGCCGGAGAT CGGGCCGGAC
ACGCTCGCCT ACATGCAGTA CACCTCCGGC TCCACGAGCG AGCCGCGCGG CGTCATGCTC
ACCCACGCCA ACCTGCTCCA CAACGAGGAG GAGATCTGGC GGGCGATCGG CTCGCCGGAG
GAGGGCGTGG GGGTCGGCTG GCTGCCGCAC TACCACGACA TGGGCCTGAT CGGCATGCTG
CTCCAGCCGA TCTACGCGGG CGGCGACCTG TACTTCGCCT CGCCGATCGC CTTCGTCATG
CGCCCCGCGC TCTGGATGGA GATGATCAGC CGCTACCGGG CCGGATACAC CGTCGCGCCG
AACTTCGCCT ACGAGTGGTG TGCCGGCCGG GTCACCGACG GGCAGGTGGC CGGCCTCGAC
CTGTCGAGCC TGCGGTTCGC GCTCAACGGG GCCGAACCGG TCCGCACCGG CACGCTGCGC
GCCATGACCG GGCGCTTCGG GGCCGCCGGT TTCAGCGAGA AGGCCTGGGC CCCGGCGTAC
GGCATGGCCG AGGCCACCCT GGTGGTCACC GCCACCCCGC TGGGGCACGG GCCGCTGATC
CGCCGGTTCG ACACCGGCGC GCTGGAGCGG CACGAGGCGG TCCCCGCGCC GGACGGCGTG
GAACTGGTCG GCTGCGGGCG GCCGATCAGC ATGACCGTGC GGATCGTCGA CCCCGAGACC
CACGCGGTCC TGCCGGACGG GAGCGTCGCC GAGATCTGGG TGCGCGGCGC GAGCGTCGCG
CGGGGCTACT GGCAGCGCGC GGAGGCCAGC CGCGACGCCT TCGGCGGGCG CACCGCCGAC
GGCGACGGGC CGTTCCTGCG GACCGGGGAC CTCGGCTTCA TGCTCGACGG GGAGCTCTAC
GTCACCGGCC GGAGCAAGGA CGTCGTCATC GTCAACGGGC GCAACCTCTA CCCGCAGGAC
CTGGAGGAGG CGGCCCGGGA GGCGCACCCG TCGCTGGGCG CCGCGGCGGC CTTCGGGGTC
GAGGCGGGGG GCGAGCACGT GGTGCTCGTC CAGGAGGTCC GCCGGCAGCG TCTGGGCGGC
GCCTCCGCCG GAGAGGTCGC CCGCCTGGTC CAGGGAGAGC TCGCCCGCCT GTTCGGCCTG
CCGTCGATGA GCGTCGTGCT GGTCGAGCGC GGCGGGGTCG GCAAGACCAC CAGCGGCAAG
GTCCAGCGCT CCCGCACCCG CGACCTGCTG CTGGGTGGGT CGCTGCCCGT CGTCCACGCC
GAGCTCACGG CGGCGGTCGC CGCGCGGGCC GAACAGGCCG GGCCCGGCGC GCCGGCCGCG
CATGCCGTAC CGGCCGCACA CGCCGTACCA GCCGCGCAGG CCGTACCGGC CGCGCGCGCC
GTAGCAGAAG CCGTAGCAGA AGGAGCGTGA
 
Protein sequence
MSFVERVRAQ ADRCGHERSY TFVEDRRGEL TESRLTFAEI DTRARSTGAW LAGRRAADQT 
ALLLYPAGLE FLTAFLGCLY SRVIAVPSPL PQTDPRALER AEGIIKDADV RFVLTDSANQ
AMLTRWLRDV GLDGAVECVA TDTLDLPGPD EWAMPEIGPD TLAYMQYTSG STSEPRGVML
THANLLHNEE EIWRAIGSPE EGVGVGWLPH YHDMGLIGML LQPIYAGGDL YFASPIAFVM
RPALWMEMIS RYRAGYTVAP NFAYEWCAGR VTDGQVAGLD LSSLRFALNG AEPVRTGTLR
AMTGRFGAAG FSEKAWAPAY GMAEATLVVT ATPLGHGPLI RRFDTGALER HEAVPAPDGV
ELVGCGRPIS MTVRIVDPET HAVLPDGSVA EIWVRGASVA RGYWQRAEAS RDAFGGRTAD
GDGPFLRTGD LGFMLDGELY VTGRSKDVVI VNGRNLYPQD LEEAAREAHP SLGAAAAFGV
EAGGEHVVLV QEVRRQRLGG ASAGEVARLV QGELARLFGL PSMSVVLVER GGVGKTTSGK
VQRSRTRDLL LGGSLPVVHA ELTAAVAARA EQAGPGAPAA HAVPAAHAVP AAQAVPAARA
VAEAVAEGA