Gene Sros_6539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6539 
Symbol 
ID8669848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7173051 
End bp7173605 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content75% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003341995 
Protein GI271967799 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.334796 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00117101 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCCGAGCA TTCCCCAGCC CCTGGTCCCC GACGACGACG GCAGCGCCGA CGCCTCCGTG 
TCGTCCGCGC TCACGGCCTT CTCCGCCGGT ACGGCCGACG CCGGGGCGGT GATAGCCGCG
CTGGGCGGAG CCCGGCTGCT CGTCCCGGTG GTGGCCCTGC TGACGGAGTC GGAGGTCGGG
GAGCACGGCC TGCGGCAGGA GAAGGAGAGC GAGATGGCCC TGCCGAAGCT CATCGGCAAC
GACGGGCGCG AGGCGGTGCT CGCCTTCACC GGGGTCGAGT CGCTGCGGCT CTGGCGCCCC
GACGCCCGGC CCATCCAGGC CACCACCCTC CAGGTCTGCC AGGCGGCGGT GCACGAGAAC
GCGGCCGCGG TGGTGGTCGA CGTGGCGGGT CCGGTGCCCT TCGTGATCGA GGGGGGCGTC
CTGCGGGCGT TCGCCGCGGT CGAGTCGGGC ACCGTCGACC AGCTCGGACC CGAGGTCACC
GTGGCGCGGA TGGAGGAGCC GGCGCCGTCC CCCCGGCGGC GGCGGTTCGG CTGGCCGTTC
CGCGGACGGG ACTGA
 
Protein sequence
MPSIPQPLVP DDDGSADASV SSALTAFSAG TADAGAVIAA LGGARLLVPV VALLTESEVG 
EHGLRQEKES EMALPKLIGN DGREAVLAFT GVESLRLWRP DARPIQATTL QVCQAAVHEN
AAAVVVDVAG PVPFVIEGGV LRAFAAVESG TVDQLGPEVT VARMEEPAPS PRRRRFGWPF
RGRD