Gene Sros_6229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6229 
Symbol 
ID8669534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6839768 
End bp6841627 
Gene Length1860 bp 
Protein Length619 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003341700 
Protein GI271967504 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.109087 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGCC GGGCACTCGC GCACCGGCGC ACGACCCTGC AGCTGGCCTT CCAGTCGGCG 
GCCGAGCTGA TAACGCAGCG GATCAGGCAG CTCGGCGGGC AGGCGCACGC GCCGTCGTTC
TCGACGTCGA TCAGCGTGCT GGCGCCGGCG CCGGCGCCCT TCTCCGGGAT GGACATCCTC
GCGATGAGCC GCCTGGTGGC CGACCTGCAA CGGGCCGGGC GGGAGCTGCC CGAGGCGGGC
CGCCGGTTGA GCGCCGAACT GTCGGCGCTC TGCCTCGCGG CCCCCTCCGG CCCGCAGATC
GTCGACGCCG GGCTGTGGGC GGAGGAGCAG GTCCGGGACC TGCGGCAACG GCTGAACACG
ATCCAGCGGC AGCATGATCT CGGCACGGTC TCCCAGGCGA TGGCCGGCTT CGGCCTGTTC
GGCGGGCACG CCCCCGACCC GGACGGGGCC GGGAGGCTGA CGGCCGCCGC GGGCAACGGA
GACGCCACGG CGTTGAAGGC GCTGCTGGAC ATGCAGCGGA CCGGCAGGGA CAGGACCCTC
GCCGCCCGGC TCAACGCATG GTGGCGGCAC CTGGGCGCGG CGGTCCAAGA TCGGTTGATC
GCCGCGTCGC CGAACCTGGT CGGTGGCCTG AACGGCCTCC CGGCCACGGT CCGGGACCGG
GCCAACCGGA GGTGTCTGGC CGGGCGGAAG ACCGCGATCA CCGCAGAGCT GGAGCGGCTC
CGCCGAACGT CGGAGGACGC GGAGGCGATG GTCGAGAAGC TGGAACAGGC CCTGCCCGGC
CGTCCGACCG GCCCGTGGCT CGTGATTCCC GTGGAGTTGG AGGAGCTGTA CAGATCCTCC
AGGAAGATGG ACGAGGCGAT CAGGGAGCTG GGGCCGGAGA TGCGGCAGAT CACGGCCGTG
GAGAACGGGC TTGCCCTCGG CGGGCGGAAC GGCCGCCCTC CGGCGCTCCT GCTGCAACTG
GAACTGGGAG GTCCGGGCAG GACCGCGATC TCCTTCGGAG ATCCCGACGA GGCCGACAAC
CTGGTCACCT ATGTCCCCGG CACCGGCACC ACGCTGGAAG GCTTCACAGG GGACGCCAAC
CGCGCCGCCG TCGTGTGGGA TCAGGCGCAC TACTTTCAAC CGGATAAGAA GATCGCTTCT
ATCGCATGGC TCGGCTACAC GGCTCCGCAG TGGGAGGCAA CTCTTAGTTT GAACAGGACA
GTTGTCAACA CGAATGCCGC AGAGATGGGC GCTCCGGCAC TGGCCAGTTT CGCTGACGGT
CTGCATGCCG CGCACAAAGC GGCTTCCGGT GCCCGGTTCA CCGTGCTGGG CCACAGCTAC
GGGTCGACGG TTACGGGTCT GGCTGCCCAG CAGCGTTCAG GTGCTTTTGC CGATCAGGTG
ATCTTCGTGG GGAGTCCGGG CGTAGGGGCT GTGAAAGCGA AGGACCTGGG AGTCGGCTCG
GTGTGGGTGG GGGAGGCGCC CAACGATCCG GTGGGCGACG TGGGCTCCCT TCCTCTCCAG
TTCACCGGGA CCTTCGATGA CGCCGCGCCG TACCTCCTGA AGGTGAGCGG TCCGCTCGGT
GTCGACCCCA GCGCACCTGA ATTCGGTGCC CAGCAGTTTT ATGTGAAGGA CAGTGGGGAT
CCTGCTCACA CCTTCAGTGC CCACTCGAAG TACTGGGATG TGAACTCTAC GTCCCTCAAG
AATCTCGGAT ACCTGATCAA TGGTCAGTAC GGAGCTCTCA TCCCCTTTCC TGACCCGCCC
GTCGGGTCGG CGGAGATTCT GTCGCCTCTC GCCACGTCGC CCTCCCCGCA GTCGCCATCG
ATCTCGACCC GGAATCCGTC ACCTCATTCG CTTCCCTCGT CCACACCGGC CGGAGGATAG
 
Protein sequence
MFSRALAHRR TTLQLAFQSA AELITQRIRQ LGGQAHAPSF STSISVLAPA PAPFSGMDIL 
AMSRLVADLQ RAGRELPEAG RRLSAELSAL CLAAPSGPQI VDAGLWAEEQ VRDLRQRLNT
IQRQHDLGTV SQAMAGFGLF GGHAPDPDGA GRLTAAAGNG DATALKALLD MQRTGRDRTL
AARLNAWWRH LGAAVQDRLI AASPNLVGGL NGLPATVRDR ANRRCLAGRK TAITAELERL
RRTSEDAEAM VEKLEQALPG RPTGPWLVIP VELEELYRSS RKMDEAIREL GPEMRQITAV
ENGLALGGRN GRPPALLLQL ELGGPGRTAI SFGDPDEADN LVTYVPGTGT TLEGFTGDAN
RAAVVWDQAH YFQPDKKIAS IAWLGYTAPQ WEATLSLNRT VVNTNAAEMG APALASFADG
LHAAHKAASG ARFTVLGHSY GSTVTGLAAQ QRSGAFADQV IFVGSPGVGA VKAKDLGVGS
VWVGEAPNDP VGDVGSLPLQ FTGTFDDAAP YLLKVSGPLG VDPSAPEFGA QQFYVKDSGD
PAHTFSAHSK YWDVNSTSLK NLGYLINGQY GALIPFPDPP VGSAEILSPL ATSPSPQSPS
ISTRNPSPHS LPSSTPAGG