Gene Sros_6180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6180 
Symbol 
ID8669482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6781449 
End bp6782861 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content71% 
IMG OID 
Productamidase 
Protein accessionYP_003341653 
Protein GI271967457 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.718861 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGACC TCGCCTACCT TCCCGCGACC GAGGCCCTGC GGCTGTTCCG ATCCCGCGAG 
CTGTCCCCCG TCGAACTGAT GACCGCCGTC ATCGAACGGG CCGAAGCCGT CGAGCCGCGG
GTGAACGCGC TGAGCGAGCG TACCTTCGAG GAGGCGCTCC TTCAGGCGAA GCAGGCCGAG
CGCGCATACC GCGACGGCTC GCCACGTCCA CTGGAAGGGC TCCCGGTGGC CGCGAAGGAC
GAGCAGCCGA TCGCCGGACG GCTGGCCACG GACGGCTCGC TCGCCTACGC CACCCATGTG
GCCGGGGTAA CCCACCCGGT CATCGAGCGG GTGCTGGCCG CCGGCGGCAT CGTGCACGCC
CGCACCACGA CGCCCGAGTT CTGCTGCGCG GCGTTCACGC ACTCCCGGCT GTGGGGGGTC
ACCCGCAACC CGTGGAACCT CGACTACTCG CCCGGCGGAT CCTCCGGCGG CTCCGGGGCG
GCGCTCGCCT CCGGTACGGC CACGCTCGCC ACCGGATCCG ACATCGGCGG CTCGATCCGC
CTCCCCGCCG CCAACACCGG CACCGTCGGA TACAAACCGC CCTACGGCCG GGTGCCGGCG
ATGCCTCCGT TCAACCTGGA CCACTACTGC CACGACGGGC CGATGGCCCG TACCGTCGCC
GACTGTGCGC TGCTGCAGAA CACCATCGTC GGTCCTCACC CCGGCGACGT GGTCTCTCTC
CGCCCGGCGG TCCGCATCCC CGACCAGCTC GGAGACGTCA CCGGGCTCCG CATCGCCTAT
GCCCCCAACC TGGGCGACTG GGAGATCGAG CCCGGCATCG CGGCCAACAC CCGAGCCGTC
GCCGACGCTC TGACGGCGGC CGGAGCGATC GTCGAGGAGG TGGAGGTCGG ACTGCGCCGC
GCCGATGTCA TGCGCGCCGC GTTCATCCAC TTCGGCACCA TCTTCGGCCC CATGGTCGCC
AACGTCGCGG CCGAACACGG CGACAGGCTG ACCCGATACG CCCTCGCCTT CGCCGCGGAG
TCCCGGGCGG CGGCGGAGTG GGACGGCTTC CTGGCCGGGC TGGAGATGGA GGCGGCGATC
TACGCGGTCA TCGGCGCGCT GCTGGACCGC TACGACGCGC TGATCTGCCC GACTACCGGG
GCGCCCGCCC TACGCGCGGG CGAGGACTAC ATCGACACCA AGCTGACCGT GAACGGCGTC
GAGCTCGACC ACTACATGGA CTATTCACTG ACGACGGTCT TCAACATCGC CAGCCGCTGC
CCGGTCCTCA ACGTCCCGTC CGGACGAGCC GCGGACGGCG TCCCGACAGG CGTGCAGATC
GTCGGGCGCA GCTACGACGA CGCGACCGTC TTCCAGATCG GTGCCGCCAT CGAGCGTGTC
CGCCCGTGGG CGTTCCGCCC TGAATCTCTC TGA
 
Protein sequence
MTDLAYLPAT EALRLFRSRE LSPVELMTAV IERAEAVEPR VNALSERTFE EALLQAKQAE 
RAYRDGSPRP LEGLPVAAKD EQPIAGRLAT DGSLAYATHV AGVTHPVIER VLAAGGIVHA
RTTTPEFCCA AFTHSRLWGV TRNPWNLDYS PGGSSGGSGA ALASGTATLA TGSDIGGSIR
LPAANTGTVG YKPPYGRVPA MPPFNLDHYC HDGPMARTVA DCALLQNTIV GPHPGDVVSL
RPAVRIPDQL GDVTGLRIAY APNLGDWEIE PGIAANTRAV ADALTAAGAI VEEVEVGLRR
ADVMRAAFIH FGTIFGPMVA NVAAEHGDRL TRYALAFAAE SRAAAEWDGF LAGLEMEAAI
YAVIGALLDR YDALICPTTG APALRAGEDY IDTKLTVNGV ELDHYMDYSL TTVFNIASRC
PVLNVPSGRA ADGVPTGVQI VGRSYDDATV FQIGAAIERV RPWAFRPESL