Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5980 |
Symbol | |
ID | 8669274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 6555131 |
End bp | 6556846 |
Gene Length | 1716 bp |
Protein Length | 571 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_003341457 |
Protein GI | 271967261 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.252652 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.17606 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGACG CTGCCCTGCC CGAAATCACC GACATCCCCG AGGTTGCCGC CGGGCCGTCC GAGTTCACGC TCCTCGGCCT GCCGAAGCCG CTGGTGACCG GGCTTTCCCG CCAGGGCATC GACAGCCCCT TCCCCATCCA GAGCGCGACG ATCCCCGACA TCCTCGCCGG CAGTGACGTC CTCGGCCGCG GCCAGACCGG CTCCGGCAAG ACGCTGGCCT TCGGCCTGCC CATGATGGCC CGCATCGCCG GGAGCAAGGC CCGTCCGGGC CGCCCCCTCG CCGTCGTCCT CGTGCCGACC CGCGAGCTGG CCATGCAGGT GACCGACGCG CTCGAGCCGC TCGGCCGGGG CCTGTCCCTG AGGATGAAGA CCGTCGTCGG CGGCATGTCG ATGGGCCGGC AGATCGAGGC GCTGCGCCGC GGCGTCGAGG TCGTCGTGGC CACTCCGGGC CGGCTGACCG ACCTGATCCA GCAGGGCGAG TGCACGCTGG ACGAGGTCCA GGTGACCATC CTGGACGAGG CCGACCACAT GTGCGACCTC GGCTTCTTCC CGGTCGTCAG CGCGATCCTG CAGCAGACCC CGGCCGACAG CCAGCGCCTG CTGTTCTCCG CCACCCTCGA CGGCGACGTC GACAAGCTCG TCCGCCGCTT CCTCACCGAC CCGGTGACCC ACTCCATGGC GCCGGTCGCC TCCTCGGTGG ACACCATGGA GCACCACGTG CTCGAGGTGC ACCGCGACGA CAAGTTCCCG GTGACGGCCG AGATCGCCAA CCGCGAGGGC CGCACCATCA TCTTCGTGCG CACCCAGCAC GGAGTGGACC GCCTCTGCAA GCAGCTCGCC CAGGTCGGCA TCAAGGCCGG CGGCCTGCAC GGCGGCAAGC GCCAGAACCA GCGCACCCGC ATCCTGGCCG AGTTCAAGGA AGGTGCGATC AACGTCCTGG TCTGCACCGA CGTCGCGGCC CGCGGCATCC ACGTCGACAA CATCAGCCTC GTGCTGCACG TCGACCCGCC GCAGGACCAC AAGAGCTACC TGCACCGCGG CGGCCGTACC GCCCGCGCCG GGGAGAAGGG CACCGTCATG ACGCTGGTGC TCCCCAACGA GCGCCGCTCC ACCGACGCGA TGACCCGCCG CGCGGGCATC AAGCCCTTCC GTCTCAAGGC CACGCCGGGC CACCCGCGCC TGGAGGAGGT CGCCGGTGCG CGCCAGCCCA GCGGCGAGCC GATCCCGGTC TGGGAGCCCT CGGCTCCGGC CGCCAAGCAG CGCGAGCGTC GCGGTTTCGG CGGCAACGGC GGTGGCCGCG GTCCGCGCCG CTTCCGTGAC CGTCCCGCCC ACGGCGGCGA GGGCCACCAG CCCCGCGAGC GCTCCGCCGG CGACGCCGCC CGTGGTGGCG AGCGCGGTGG CAACGGCAGC GTGAGCGACG TGCGCGGCCA GTACCGCTCC GAGCGTTCCG GCGGCTACCG CGGCGACCGC TCCAGCGGCG GCGGCTACCG TGGTGACCGT CCCGCGGGCG ACCGCGAGCC GTTCCGCGGC GACCGCCCCG CCGGCGGTGG CGGCGGTTAC CGCGCCGGCG AGCGGCGTGA GCCGTTCCGC AGCGGCGAGC GCCAGGGCGG CGCTTTCCGC GCCGAGGGCC GTTCCGACGG CCGCGGCGAC AGCCGTGGCG GTGGCTTCCG CGGTGGCCGC CAGGGCGACC ACGCCGCGGG CCGCTACGGC CGCTGA
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Protein sequence | MLDAALPEIT DIPEVAAGPS EFTLLGLPKP LVTGLSRQGI DSPFPIQSAT IPDILAGSDV LGRGQTGSGK TLAFGLPMMA RIAGSKARPG RPLAVVLVPT RELAMQVTDA LEPLGRGLSL RMKTVVGGMS MGRQIEALRR GVEVVVATPG RLTDLIQQGE CTLDEVQVTI LDEADHMCDL GFFPVVSAIL QQTPADSQRL LFSATLDGDV DKLVRRFLTD PVTHSMAPVA SSVDTMEHHV LEVHRDDKFP VTAEIANREG RTIIFVRTQH GVDRLCKQLA QVGIKAGGLH GGKRQNQRTR ILAEFKEGAI NVLVCTDVAA RGIHVDNISL VLHVDPPQDH KSYLHRGGRT ARAGEKGTVM TLVLPNERRS TDAMTRRAGI KPFRLKATPG HPRLEEVAGA RQPSGEPIPV WEPSAPAAKQ RERRGFGGNG GGRGPRRFRD RPAHGGEGHQ PRERSAGDAA RGGERGGNGS VSDVRGQYRS ERSGGYRGDR SSGGGYRGDR PAGDREPFRG DRPAGGGGGY RAGERREPFR SGERQGGAFR AEGRSDGRGD SRGGGFRGGR QGDHAAGRYG R
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