Gene Sros_5948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5948 
Symbol 
ID8669242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6519638 
End bp6520543 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content79% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003341426 
Protein GI271967230 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.720935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0319733 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCCACG CCTGCCGGGA CGCTTACGAT CGTTCCGTGA CGACGAGCCG CCCTCCGGGC 
CTGGGCCGTG AATCCGGGCC CCAGGCCGTT CTGGGGCTGG TGCGGGCCTG TCACCCGGGG
CCGACCGTGG CGGTCACCGC ACTGGTGACC GCGCTGGCCG TGGCGAGCGG GCGCGACGCG
GCCGGGTGCG CCCTGGTGGC CGCCGCCGTG CTGACCGGTC AGCTCTCGAT CGGCTGGTGC
AACGACGCGG TGGACGCCGG GCGGGACGTC GCGGCGGGCC GTACCGGCAA GCCGGTTGCC
GACGGCGCGG TGAGCGTCCG GACGGTGTGG GCCGCGGCGG CCGCCGCCCT GGTGCTCTGC
GTGCCGCTCT CCCTCGCCTC CGGCCTGGCG GCCGGGACCG TCCACCTCGC CGGGGTCGCC
GCGGCCTGGG CCTACGACCT GTGGCTGAAG GCCACCGTGC TGTCGTGGCT GCCCTACGCC
GTGGGCTTCG GCGTGCTGCC GCCGTTCGTG ACCCTCGGGC TGCCGGGCGG TCCGTGGCCC
GCGTGGTGGG CGGTCCTCGC CGCGGCGCTC CTCGGCTGCG GGGCGCACCT GGCCAACGTG
CTGCCCGACA TCCCCGCCGA TCTCGCCACC GGGGTCCGCG GCTGGCCGCA GCGGCTCGGC
CCGGCCCGCG TCCGCGCCCT GGTCCCGGTG CCGCTGCTGC TGGCCACCGG GCTGCTCGTC
TTCGGGCCTC CGGGACCGGT CGGCGCCGGG GGCTGGGCCG CGCTCGCCGG GGCCGGGGCG
TTCGCCGTCG CCGGGCTGCT GGCGGCGGGG CGCTCACCGC GCGCCCCCTT CGTGGCGGCC
GTCGCCGTCG CGGCGGTCGA CGTGCTGCTC CTGCTCGCCC GGGGCACCGA GATCACCGCG
CTCTGA
 
Protein sequence
MLHACRDAYD RSVTTSRPPG LGRESGPQAV LGLVRACHPG PTVAVTALVT ALAVASGRDA 
AGCALVAAAV LTGQLSIGWC NDAVDAGRDV AAGRTGKPVA DGAVSVRTVW AAAAAALVLC
VPLSLASGLA AGTVHLAGVA AAWAYDLWLK ATVLSWLPYA VGFGVLPPFV TLGLPGGPWP
AWWAVLAAAL LGCGAHLANV LPDIPADLAT GVRGWPQRLG PARVRALVPV PLLLATGLLV
FGPPGPVGAG GWAALAGAGA FAVAGLLAAG RSPRAPFVAA VAVAAVDVLL LLARGTEITA
L