Gene Sros_5555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5555 
Symbol 
ID8668849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6076121 
End bp6076903 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content71% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003341050 
Protein GI271966854 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.620464 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.438645 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCCG AACGCACGAC CACCGGCCGG CGGGAGAGGC TGCGCCAGGC CACCTTGGAG 
GAGATCCACG CGGCCGTGCG CAGGCTGCTG GTCACGCAGG GATCGGCGGC GGTGACCATC
AACGCGGTGG CCCGGGAGAT GGGCATGAGC GGCCCGGCTC TCTACCACTA CTACGCCGGC
CACGACGACC TGGTCGGCGC GGTCACCGCG GACTTCTTCC GCGAGCTGGC CACCGCGATG
GAACAGGCCC GGGACGCCCA CGCCGACGCG CAGGTCGGCG AGCGGATACT GGCGGTCTGC
CGCGCCATGC GCGCCTGGGC CATCGCCCAC CCGGCCGAGT TCGGCTGGAT ATTCGCCAGC
CCGATAGCCC CGCCGAACAG GCAGCGGGAC TCGGCGCGCC ACCAGGCGGC GCAACGTTTC
GAGCAGGTCC TGCTGGACCT GACGGTCGAG CTGTGGCGGA CGCGGGGGTT CCCGGCGCCC
GACCTGGTCG ATCTGCCCCC GTCGCTGCGC GAGCAACTGA CCGCCTACTC CGCCGGCATC
GACGGACGGC TACCACCCGA GGCCGTCCAC GTCTTCCTGA CGTGCTGGAT CAGGCTGTAC
GGCCTGCTGT GCATGGAAGT CCTGCACCAG CTGGACTTCG CCTACTCCGA CCTGGAACCC
GTCTTCGAGG AATGCCTGCG CGACCTGGCC GGCATGCTCG CGCTGGACCA CTCCGGCCGG
CCGTTCCCCC GGGCGAGGAG TTCCGAAGCG GTCAGTGATC CTGGACGGTC AGAGACCGGG
TGA
 
Protein sequence
MMAERTTTGR RERLRQATLE EIHAAVRRLL VTQGSAAVTI NAVAREMGMS GPALYHYYAG 
HDDLVGAVTA DFFRELATAM EQARDAHADA QVGERILAVC RAMRAWAIAH PAEFGWIFAS
PIAPPNRQRD SARHQAAQRF EQVLLDLTVE LWRTRGFPAP DLVDLPPSLR EQLTAYSAGI
DGRLPPEAVH VFLTCWIRLY GLLCMEVLHQ LDFAYSDLEP VFEECLRDLA GMLALDHSGR
PFPRARSSEA VSDPGRSETG