Gene Sros_5447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5447 
Symbol 
ID8668741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5970294 
End bp5970980 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content73% 
IMG OID 
Productresponse regulator receiver protein 
Protein accessionYP_003340947 
Protein GI271966751 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00883739 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.15212 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCAGC TGCTTCTCGT CGAGGACGAC GCCCAGGTGC GATCCGCGCT GACCCGCGCG 
CTCACCGAAC GCGGTCACGC CGTCATCTCG GCCGCCGCGG GCATGCCGGG GCTCACCCGG
GCGCTGGAGG ACCGGCCTGA CCTGGTCGTG CTCGATCTGG GCCTGCCCGA CCTCGACGGC
TGCGAGGTGC TGCGCATGCT GCGGGCCGTC AGCGCCGTCC CGGTCATCGT GGCGACCGCG
CGCGACGACG AGCCTGAGAT CGTCCGGGCG CTGGACGCCG GGGCCGATGA CTACGTCGTC
AAGCCGTTCA GCGCGGCCCA CCTGGACGCC CGGATCCGGG CCGTGCTGCG CCGCGGCCGG
GACGCCGACG AAGGGACGGC GCCGGTGCGG GTCGGCGGGC TGCTCATCGA GCAGGCGGGC
AGGGAGGCGT TCCTCGACGG CGTCCGTCTC GATCTGACGC CCAAGGAGTT CGACCTGCTG
CACTATCTCG CGGCCCGCCC CGGCCAGGTC GTCTCCAAGC GGGAGCTGCT CACCGAGGTG
TGGCGGATGG CGTACGGCGG TGCGGACAAG ACCGTCGACG TGCACCTGTC CTGGCTGCGC
CGCAAGCTCG GCGAGAGCGC CCAGGCCCCC CGCTACCTGC AGACCGTCCA CGGCGTCGGC
GTGAAGATCG TCGACCCGGG AGCATGA
 
Protein sequence
MAQLLLVEDD AQVRSALTRA LTERGHAVIS AAAGMPGLTR ALEDRPDLVV LDLGLPDLDG 
CEVLRMLRAV SAVPVIVATA RDDEPEIVRA LDAGADDYVV KPFSAAHLDA RIRAVLRRGR
DADEGTAPVR VGGLLIEQAG REAFLDGVRL DLTPKEFDLL HYLAARPGQV VSKRELLTEV
WRMAYGGADK TVDVHLSWLR RKLGESAQAP RYLQTVHGVG VKIVDPGA