Gene Sros_5446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5446 
Symbol 
ID8668740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5969006 
End bp5970283 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content77% 
IMG OID 
ProductSignal transduction histidine kinase-like protein 
Protein accessionYP_003340946 
Protein GI271966750 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0114827 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.17199 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCGAC GCCTGGCCCT GCTCGCGGTG GCGACCACCT CGCTGGTCCT GGTCGCCTTC 
CTCGTGCCGC TCGCCGTACT GGTGAGCACG CTGGCCGCCG AGCGGGCCAC GGCCGCCGCC
ACCACCTGGG CGCAGTCGGT GGCCACCGCG GCGGCCCTGG GCGACCAGGA CACCCTCGAC
GCCACCGTAC GGCAGGCCAA CGGCTCCGGC GGCACACCGA TCACGGTCTT CCTGTCCGGC
CACGAGTTCC TCGGCGTGCC GGCGCCCCGC GGTCCCGGCG TCGAGCTGGC CGCGCGCGGG
CGCAGCGTCA CCGTCGAGAC CCCGGCCGGC CGGGAGATCC TGGTGGCCGT CCAGGGCGGG
GAGCGCGGCA CCATGGTCGT CCGCGCGTTC GTCGGCACCG AGCGGCTCCG GGAGGGGGTC
GGGCGGGCGT GGTCCGTGCT GGGCCTGATC GGGCTGGCGT TGCTCGCGGT CGGGATCGTC
GTCGCCGACC GGCTCGCCCG CTCGCTGATC CAGCCGGTCG GGCAGGTCGC GGGGGTCTCC
CGCCGGCTGG CCCGCGGCGA TCTGGACGCG AGGGTGGAGC CGGCGGGCCC GCCGGAGATC
CGCGAGGTCG GCGCCGCCCT CAACCATCTG GCCGCCCGCA TCCGCGAGCT GCTCACCCGC
GAGCGGGAGG CGGTCGCCGA TCTCTCCCAC CGGCTGCGCA CGCCGGTCAC GGCGCTGCGG
CTGGAGGCCG AGACCCTGCG GGACAAGGAC GAGGCGGCCC GGATGGGAGA GGCCGTCGAC
AGCGTCGAGC GCATGGTCAG CCAGGTCATC CGGGAGGCGC GCCGGTTCGA TCGGGGAGGC
GCGCCGAGCT GCGACGCCGC CCAGGTGGTC GGCGACCGCG TCGCCTTCTG GTCGGCGCTG
GCGGAGGACC AGGACCGGCC GCTCCGCCTC GGCCTGGCCG ACGGCCCGAT CACCGTGGGG
GTGAGCGGCC CGGAGCTGGC GGCCTGCGTC GACCTGCTGC TGGAGAACGT GTTCGCCCAC
ACCCCCGACG GGACCTCGTT CACCGTCGAG CTGACGGTGC GGCCGGGCGG CGGCGCCCTG
CTGGTGATCG CCGACGAGGG GTCCGGCTTC GCCCTCCCGG ACCCGGTCGG CCGCGGGGCG
AGCGGCGGGT CCTCCACCGG CCTCGGCCTC GACATCGCAC GCCGTACCGC GGAGGCCTCG
GGCGGGCGGC TGCGGGCCGG CGCGTCGCCC TCGGGGGGAG CCGAGGTCGC CCTCGAACTC
GGCCCCGGCC TGACTTAG
 
Protein sequence
MRRRLALLAV ATTSLVLVAF LVPLAVLVST LAAERATAAA TTWAQSVATA AALGDQDTLD 
ATVRQANGSG GTPITVFLSG HEFLGVPAPR GPGVELAARG RSVTVETPAG REILVAVQGG
ERGTMVVRAF VGTERLREGV GRAWSVLGLI GLALLAVGIV VADRLARSLI QPVGQVAGVS
RRLARGDLDA RVEPAGPPEI REVGAALNHL AARIRELLTR EREAVADLSH RLRTPVTALR
LEAETLRDKD EAARMGEAVD SVERMVSQVI REARRFDRGG APSCDAAQVV GDRVAFWSAL
AEDQDRPLRL GLADGPITVG VSGPELAACV DLLLENVFAH TPDGTSFTVE LTVRPGGGAL
LVIADEGSGF ALPDPVGRGA SGGSSTGLGL DIARRTAEAS GGRLRAGASP SGGAEVALEL
GPGLT