Gene Sros_5399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5399 
Symbol 
ID8668693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5916367 
End bp5917095 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content74% 
IMG OID 
ProductDeoR family transcriptional regulator 
Protein accessionYP_003340904 
Protein GI271966708 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.054992 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.41602 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCGC TGCGCGTCAG CGACACCGTT TCGGTGGCCG AGCTGGCCGT CGAGCACGCG 
GTGTCGGAGA TGACCATCCG CCGCGACCTC GACGAGCTCG CCCAGCAGGG CGTGGTGAGG
CGGGTGCGCG GCGGCGCGGT GAGCCTGCTG CTCCGCGGGG AGGAGCCGCC GTTCGGGGTC
CGCGAACGCG AGGCGGTGGA GGCCAAACGG CGCATCGCCG CCGAGGTCGC CTCGCTGCTC
TCCGACGGCG AGGCCGTGCT GCTGGACGGC GGGACCACCA ACCTGGAGAT CGCCAGGGCG
ATCCGCGACC GCCGCCTGAC GGTCCTGCCG CTCTCCCTTC AGGCCGCCCA CGAGCTCGGC
ACGGCCCCGC GGGTCCGCCT GGTGCTCCCC GGCGGCGAGG TCCGCCCCGG GGAGCTCAAC
CTCATCGGCC CCCTGACCGA GAACGCCATC CGCTCCCTGC GCTTCGACAC CGCGGTCATC
GGCTGCTGCG GTCTGTCCGC CGAGCACGGC CTGACCGCCC ACGACCTGTC CGACGTCGCC
GTCAAGCAGG CGGCGATCTC CTCGGCCCGG CGCGTCGTCG TGGCCACCGA CTCCGGCAAG
TTCAGCCGCA CCGCCTTCGG CGCCGTCTGC CCCCTGGACC GCCTCGACAT GGTGGTCACC
GACACCGCGC TGCCTCCCGC CGAACACGAC GCCCTCATCG CCGCGGGCGT CATCGTCCGC
ACCGTCTGA
 
Protein sequence
MSALRVSDTV SVAELAVEHA VSEMTIRRDL DELAQQGVVR RVRGGAVSLL LRGEEPPFGV 
REREAVEAKR RIAAEVASLL SDGEAVLLDG GTTNLEIARA IRDRRLTVLP LSLQAAHELG
TAPRVRLVLP GGEVRPGELN LIGPLTENAI RSLRFDTAVI GCCGLSAEHG LTAHDLSDVA
VKQAAISSAR RVVVATDSGK FSRTAFGAVC PLDRLDMVVT DTALPPAEHD ALIAAGVIVR
TV