Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5399 |
Symbol | |
ID | 8668693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 5916367 |
End bp | 5917095 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | DeoR family transcriptional regulator |
Protein accession | YP_003340904 |
Protein GI | 271966708 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.054992 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.41602 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGCGC TGCGCGTCAG CGACACCGTT TCGGTGGCCG AGCTGGCCGT CGAGCACGCG GTGTCGGAGA TGACCATCCG CCGCGACCTC GACGAGCTCG CCCAGCAGGG CGTGGTGAGG CGGGTGCGCG GCGGCGCGGT GAGCCTGCTG CTCCGCGGGG AGGAGCCGCC GTTCGGGGTC CGCGAACGCG AGGCGGTGGA GGCCAAACGG CGCATCGCCG CCGAGGTCGC CTCGCTGCTC TCCGACGGCG AGGCCGTGCT GCTGGACGGC GGGACCACCA ACCTGGAGAT CGCCAGGGCG ATCCGCGACC GCCGCCTGAC GGTCCTGCCG CTCTCCCTTC AGGCCGCCCA CGAGCTCGGC ACGGCCCCGC GGGTCCGCCT GGTGCTCCCC GGCGGCGAGG TCCGCCCCGG GGAGCTCAAC CTCATCGGCC CCCTGACCGA GAACGCCATC CGCTCCCTGC GCTTCGACAC CGCGGTCATC GGCTGCTGCG GTCTGTCCGC CGAGCACGGC CTGACCGCCC ACGACCTGTC CGACGTCGCC GTCAAGCAGG CGGCGATCTC CTCGGCCCGG CGCGTCGTCG TGGCCACCGA CTCCGGCAAG TTCAGCCGCA CCGCCTTCGG CGCCGTCTGC CCCCTGGACC GCCTCGACAT GGTGGTCACC GACACCGCGC TGCCTCCCGC CGAACACGAC GCCCTCATCG CCGCGGGCGT CATCGTCCGC ACCGTCTGA
|
Protein sequence | MSALRVSDTV SVAELAVEHA VSEMTIRRDL DELAQQGVVR RVRGGAVSLL LRGEEPPFGV REREAVEAKR RIAAEVASLL SDGEAVLLDG GTTNLEIARA IRDRRLTVLP LSLQAAHELG TAPRVRLVLP GGEVRPGELN LIGPLTENAI RSLRFDTAVI GCCGLSAEHG LTAHDLSDVA VKQAAISSAR RVVVATDSGK FSRTAFGAVC PLDRLDMVVT DTALPPAEHD ALIAAGVIVR TV
|
| |