Gene Sros_5114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5114 
Symbol 
ID8668408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5627947 
End bp5629257 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content64% 
IMG OID 
Productaminotransferase class-III 
Protein accessionYP_003340640 
Protein GI271966444 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.128293 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTAATG CGTCATTCTG GAATGATGTG GAATGTCACC TGATCCGATA CGGCGCGACG 
TTCACTCCAA GGATCATCGA ACGGGCCGCG GGGTCGTACG TGTATGACGA CGCCGGGACG
GCGATCCTCG ACTTCACCTC GGGTCAGATG AGCTCGATCC TCGGGCACTC CCACCCCGAC
GTGGTTGCGA CGGTCTCGCG GTCGATCTCA TCGCTGGATC ACCTGTACAG CGGCATGCTG
AGCCGGCCCG TCGTCGACCT GGCCAACCGG CTCGCGTCAA CACTTCCCGG CGACTTGAGC
AAGACGCTGC TGCTGAGCAC CGGCGCGGAG TCCAATGAGG CCGCGATCAA GATGGCCAAG
CTCTACACAG GCAAGTATGA GATCGTCTCG TTCGACCGGT CGTGGCACGG TATGACGTCG
GGTGCGTCCT CCGCCACCTT CTCGGCCGGC CGAAGAGGCT ACGGCCCGTC CATGCCGGGC
AACCTCACGC TCCCGTCGCC GAACGCGTAT CGCTCTCCTT TCCGTCGTAC GGACGGGTCC
TACGACTGGG AGGCCGAGCT TGAGTACGGG TTCGCTCTCG TCGACCAGCA GTCGTCCGGG
AGTCTGGCCG CATGCATGGT CGAGCCGATC CTGTCCGCCG GTGGGATCAT CGAGCCTCCG
GTCGGATATC TGCGGCGATT GAAAGCGATG TGCGCCGAAC GCGGGATGCT GATGATCGTG
GACGAGGCCC AGACCGGACT CGGACGCACC GGCGAGATGT ACGCCTTCGA ACGCGACGGC
ATCGTCCCGG ATCTCCTGAC GCTTTCCAAG ACCTTGGGTG CGGGCCTGCC GGTAGCGGCC
GTCGTCACGT CGTCGCAGAT CGAGGAGGTC TGTCACGAAC GCGGGTTCCT GTTCTTCACG
ACCCACGTCT CGGACCCACT GGCGGCATCC GTCGCGGTGA CTGTGCTCGA CGTCATCGAA
CGCGACAGTC TCGCGGCGCG GACCGCGGTT CTGGGTAAGC AACTCAACGA GCGGTTGCTG
GACCTGCGTG ACCGCTTCGA GGTGGCCGGC GATGTGCGCG GTCGCGGGCT TCTGCAGGGC
CTGGAACTGG TGACGGACAA GCTGAGCAAG TCCCCCGCGG ACTCGCTCGC AAATGCCGTG
ACCATGGCAT GTCTGGAGCG CGGGCTCCAC ATCAACATCG TTCAATTGCC AGGAATGGGA
GGAATCTTCC GGATCGCACC GCCGCTCACG ATCAGCGACT CGGACTTGCA CGCCGGCCTG
GACATCCTCG AGGCATCTCT GAGAGCGGTC GTCTCCGGGG GTGGAAAGTA A
 
Protein sequence
MSNASFWNDV ECHLIRYGAT FTPRIIERAA GSYVYDDAGT AILDFTSGQM SSILGHSHPD 
VVATVSRSIS SLDHLYSGML SRPVVDLANR LASTLPGDLS KTLLLSTGAE SNEAAIKMAK
LYTGKYEIVS FDRSWHGMTS GASSATFSAG RRGYGPSMPG NLTLPSPNAY RSPFRRTDGS
YDWEAELEYG FALVDQQSSG SLAACMVEPI LSAGGIIEPP VGYLRRLKAM CAERGMLMIV
DEAQTGLGRT GEMYAFERDG IVPDLLTLSK TLGAGLPVAA VVTSSQIEEV CHERGFLFFT
THVSDPLAAS VAVTVLDVIE RDSLAARTAV LGKQLNERLL DLRDRFEVAG DVRGRGLLQG
LELVTDKLSK SPADSLANAV TMACLERGLH INIVQLPGMG GIFRIAPPLT ISDSDLHAGL
DILEASLRAV VSGGGK