Gene Sros_5020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5020 
Symbol 
ID8668314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5547677 
End bp5548267 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content70% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003340558 
Protein GI271966362 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0294081 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0543061 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACACTC GTTTCATGAG CACTGCGGAA CGTCTCATCG CAAGCACTCG CGAGCTGCTG 
TGGGAACGCG GCTACACCGG CACCAGCCCG AAGGCGATCC AGCAGCGGGC CGGGGTCGGG
CAGGGCAGCA TGTACCACCA CTTCGCCGGC AAGCCGGACC TGGCACTCGC CGCGATTCGC
CGTACCGCCG AGGAGATGCG CGCCAAGGCC GAGGAGCAGT TGTCCGCACC GGGGACCAGC
GTGGACCGCG TCACCGCGTA CCTGCGCCGG GAGCGGGACG TCCTCAAGGG CTGTCCCATC
GGACGTCTCA CCCAGGACCC GGACGTCATG GCCGACCCGA CGCTGCGGGC CCCGGTAGAC
GAAACCCTGG CCTGGCTACG TGAGCGCCTC GCCGAGGTCC TGGCCGAGGG ACGCGAGCGC
GGCGAACTGG ACACCACGCT GGACCCGCAG GCTGCCGCCG CGACCGTCGT CGCGGTCCTG
CAGGGCGGCT ATGTCCTGGC CCGTGCCGCC GACTCCGTGC AGCCGTTCGA CCAGGCGATC
ACCGGGGTGC TGGGCCTGCT GACCACACAT ATCTCCCCCA CCCGCAAGTA G
 
Protein sequence
MYTRFMSTAE RLIASTRELL WERGYTGTSP KAIQQRAGVG QGSMYHHFAG KPDLALAAIR 
RTAEEMRAKA EEQLSAPGTS VDRVTAYLRR ERDVLKGCPI GRLTQDPDVM ADPTLRAPVD
ETLAWLRERL AEVLAEGRER GELDTTLDPQ AAAATVVAVL QGGYVLARAA DSVQPFDQAI
TGVLGLLTTH ISPTRK