Gene Sros_4885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4885 
Symbol 
ID8668179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5409272 
End bp5409880 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content73% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003340445 
Protein GI271966249 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0329972 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0964504 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCACCT CCCAGCGAGA CCGCCTCGTG GAGGCCATGC TGAGGCTCGT CGCGAGGCGT 
GGATACGCCG CCACGAGCGT GCCGGACGTG ATCGCCGCCG CGCGGGTCTC GCGCAACGCC
TTCTACGCCC AGTTCGCCGA CAAGGAGGCG TGCTTCCTCG CCGGATGCGA GCGCGACCTG
CCCGAGCTGA TCGATTCGAT CCGCACGGCC GCGTCGGGGG CGGGCGACCG CTGGAGCGAG
GCGCTCCGGC TGGGGATGGC CGCCTACCTG CGGTGGTGGC AGGAGCGCCC GGAGTACGCG
CAGGCGTACT TCGTGGAGCT GCCGAGGGCG GGTGAGCGGG CCGTCGAGCA GCGTGACGCC
GCCTACCGGC CCTTCCTCGA CATGTTCGGG GCGCTGGCCG CGCGGGCCAG GCTGGAGGAT
CCCTCGCTGC CGCCGCTGCG TGCCGCGGTG CCCCGCCTGA TCGTCTACGG GATCACCGAG
TTCATCGCCT CGGAGGTGCG TGAGGGCCGC GTCACCACTC TGACGTCGTC GGCCGGCGAC
CTCTACCACT ACACGGTCGC CCTGCTCGCC GGCCCCGATC ACGGCATCGC GACCACCCCT
TCCGCCTGA
 
Protein sequence
MRTSQRDRLV EAMLRLVARR GYAATSVPDV IAAARVSRNA FYAQFADKEA CFLAGCERDL 
PELIDSIRTA ASGAGDRWSE ALRLGMAAYL RWWQERPEYA QAYFVELPRA GERAVEQRDA
AYRPFLDMFG ALAARARLED PSLPPLRAAV PRLIVYGITE FIASEVREGR VTTLTSSAGD
LYHYTVALLA GPDHGIATTP SA