Gene Sros_4647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4647 
Symbol 
ID8667941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5169602 
End bp5170927 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340247 
Protein GI271966051 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.394865 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.107362 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCA CCACCAAGAT CCGGCCGCGC GCCCTCGTCC GTGCCTCCGG AGGCCCCCGC 
TATGCCGTCG CCCTGGCCGT GGACGCGCTC GGCACCGGCC TGCTGCGGCC CTTTCTGCTG
CTCTACGGGG TGATGGTGCT GAGGCTGTCC GCGCCGGCCA CCGGCATCGC CATGACGGTC
GGCGCCGTCG TGGGTCTGGT GTGCATGCCC GCGGTCGGCC GATGGCTGGA CCGGGGCGCA
CGCAGCACGG TCGTGGCAGC GTCGATGCTG GTGCGGGTGC TGGGCGTGGC GCTGCTGCTG
GCCACCCCGA CGGGGAACGT CTGGCTGTTC GCGACGGCGG CACTCTTCCT CGGCATCGGC
AACCAGGCAT GGCCGGCCGC CCACGCCGCC CTCGTGGCCA CGGTCGCCCA CGGCCGCGAA
CGCGACGCCG CCCTCGCGGC AGGCCGCGCC CTGCGCAACG CCGGCCTGGG CGCGGGCGCC
CTCCTCGCCA CCGCATGCCT GGCCGGCGGC ACCACCGCAT TGCAGGCGCT GGCAGCCGTC
ACCGGGCTCA CCTATCTCGC CGCGGCGGTC TTGGCGTGGT CGGTCCACGT GCACGCTCAT
CCGGCCGCTG CCGCGGCCAA GGACAGGGAC GACGAGCCCG CACCCCGGAT GCGCGCGCTG
CTGGCCGCCA ACGTGGTCTA CGTCTTCTGT CTCAACGTCC CCGAAATCGC ACTCCCCCTG
GTCCTGGTGA CACAGATGCA CGCATCCCCG GTGTGGTCGG CAGCCATCTT CGTGGCCAAC
ACGGTGCTGG TGGTCACCCT GCAGGTTCCG ATCACGGTCC TGATGTCCCG CTTCTCCCGG
CGGACCGTGC TGGCTCTCGC CGGCGTGGTC CTCACCGCGT CCTACCTCGG CTTCCTCGCG
GCTACCTCAC TGGGACACGG CTGGGGTGCC CCGGCCATCC TCGCGGTGTC CGTGGTCTGC
ACCATCGGCG AGATCATCTA TGCCGGCAGC GCCACCGCGC TCGTCACCGT CCTCGCCCCG
GCCCATCTCC TGGGACGCGC CCTCGCCCGC TTCCAGCTGT CCACGGGCTT CGGCCTCGCC
GTCTCCCCGG TGGTCATCAC CGCTCTCGCA CCCCACGGCC CGGCCGCCCT CTGGGGCAGC
CTCGCCACCG CGACGCTCCT GTCCGCCTCC GCCGTCGCCA CCGAGAAGGA TCAAGGAACG
CGGCTCGGCG GCGGCCGCCT TTCTCGCGTG CTCGCGGCCC GACTTCCAGG AGGGGCAGTT
CCAGCCGCTG TCGCCGAACA CGCGGCGGCC GCCGCAGTGG GTGAGGGGAA GCGTCGCGAC
GGGTAG
 
Protein sequence
MATTTKIRPR ALVRASGGPR YAVALAVDAL GTGLLRPFLL LYGVMVLRLS APATGIAMTV 
GAVVGLVCMP AVGRWLDRGA RSTVVAASML VRVLGVALLL ATPTGNVWLF ATAALFLGIG
NQAWPAAHAA LVATVAHGRE RDAALAAGRA LRNAGLGAGA LLATACLAGG TTALQALAAV
TGLTYLAAAV LAWSVHVHAH PAAAAAKDRD DEPAPRMRAL LAANVVYVFC LNVPEIALPL
VLVTQMHASP VWSAAIFVAN TVLVVTLQVP ITVLMSRFSR RTVLALAGVV LTASYLGFLA
ATSLGHGWGA PAILAVSVVC TIGEIIYAGS ATALVTVLAP AHLLGRALAR FQLSTGFGLA
VSPVVITALA PHGPAALWGS LATATLLSAS AVATEKDQGT RLGGGRLSRV LAARLPGGAV
PAAVAEHAAA AAVGEGKRRD G