Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4211 |
Symbol | |
ID | 8667505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 4691987 |
End bp | 4693462 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_003339856 |
Protein GI | 271965660 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.539583 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00153857 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCCCCG TGTCCCGTGA GGTCTCCCCG GCGGCCGCCG CCGCCACGCC GCAGGCCGGC GCCCCGGAGG AGCCGGCCCG CGGCGGCAAC GTAACCCTCG CCACGGCCGG TCTCGTGATC GGCATGCTGC TGTCCGTCCT GGACCAGACG GTGGTCGCCA TCGCGTTGCC GGACATGGCC GCCGACCTGG GCGGCATGGA CGCGATCGGC TGGGTCGTCA CGTCCTACGT CCTGGCCTCG ACCACCACCG GCGCCCTCTA CGGCCGGATC AGCGACCGCT TCGGCCGGCG CGCGGTCTTC GTCGCCGCGA CCGCCGTCTT CGTCGCGGGC TCCGCCCTGT GCGGCGCGGC GCAGTCGGTG CCCCAGCTGG TGGCCGCCCG GACCCTGCAG GGCATCGGGG CGGGCGCACT GTTCGTCCTG CCCACCATCG CGCTGTCCGA GCTGTACCCG CAGCGCCTGC GCAGCCGGAT TCAGGGCTTC ACCGGCGGGA TCTTCGCGCT CGCCGGCGTG GGCGGTCCGC TCGCCGGTGG AATGATCACC GACACCGCGG GCTGGCGCTG GATCTTCTAC ATCAACCTGC CTCTCGGCCT GCTCAGCATC GTCCTGGTCA CCTTCGCGCT GCGGCTGCCC AGGGCGGGCG GGGGCGCGAG GGTCGACATC GCGGGCTCCG TACTGCTGGC CGGCGCCGCG GTGAGTTTGC TGCTGGTGGC AGAGTGGGGT GGCCGCGCCT ACCCGTGGAC CTCCGGCGTG ACCCTCGCCC TGATGGGGGC CTTCGCCGTC CTCCTGGCGC TCTTCGTGTG GTGGGAGCGG CGTGCCGCCA GCCCGCTCAT CCCGCCGCGG CTGTTCGCCG CCCCCGCCCT GCGCGTCGCC CTGCCCGCCA CCGCGCTGCT CGGGGCGATG CTCGGCGGCT CGATCGTGTA CCTGCCCACC TATCTGCAGG CCGCGTACGG CATGAGCGCC ACCCAGGCGG GCCTCGCGCT CAACCCGTAC GTCATCCCCT TCATCACGGT GTCCGCCGTC GCCGGTGCCA GGATCGGCGC GAGCGGCCGG TTCAAGCCCT ACCTGCTCGC CGGTTCGGCG GTGGCGGTGC TGGGATTCGC GCTGCTGAGC CGGCTCGAAC CCGGCACCGC CTACGCCCTG CTCGCCGTGG AGCTCGGTGT ACTGGGCGTC GGCTTCGGGC TTCTGCTGCA GAACCTGGTG GTCGTCGCGC AGAACGCGGC CTCACCGGCG GACCTGGCGG CCACCACCTC CGCCGCCGTG TCCGTCCGGG GGCTCGGCAT GTCGCTCGGG GTGGCGATCT CCGGCAGCCT GCTGACCAGG GAACTCCAGG GGCAGGCTCA GTCTCCCGAG GCCATGGCCG CCGCCATCCC CGAGGTTCTC GCCTGGGGCG TGCCGGCGGC CCTGGCCCTG GTGGCGCTCG TCGCGCTGCT GCCGCCTTCG ACCGGCTCTT CCGGAGCCGA GGCGGAACCG GCCTGA
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Protein sequence | MSPVSREVSP AAAAATPQAG APEEPARGGN VTLATAGLVI GMLLSVLDQT VVAIALPDMA ADLGGMDAIG WVVTSYVLAS TTTGALYGRI SDRFGRRAVF VAATAVFVAG SALCGAAQSV PQLVAARTLQ GIGAGALFVL PTIALSELYP QRLRSRIQGF TGGIFALAGV GGPLAGGMIT DTAGWRWIFY INLPLGLLSI VLVTFALRLP RAGGGARVDI AGSVLLAGAA VSLLLVAEWG GRAYPWTSGV TLALMGAFAV LLALFVWWER RAASPLIPPR LFAAPALRVA LPATALLGAM LGGSIVYLPT YLQAAYGMSA TQAGLALNPY VIPFITVSAV AGARIGASGR FKPYLLAGSA VAVLGFALLS RLEPGTAYAL LAVELGVLGV GFGLLLQNLV VVAQNAASPA DLAATTSAAV SVRGLGMSLG VAISGSLLTR ELQGQAQSPE AMAAAIPEVL AWGVPAALAL VALVALLPPS TGSSGAEAEP A
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