| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_3997 |
|---|
| Symbol | |
|---|
| ID | 8667291 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 4452263 |
|---|
| End bp | 4453966 |
|---|
| Gene Length | 1704 bp |
|---|
| Protein Length | 567 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | Signal transduction histidine kinase-like protein |
|---|
| Protein accession | YP_003339648 |
|---|
| Protein GI | 271965452 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.224789 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.328912 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGAGC CGGGACCGGA CCCCGATACC TTTTTCCCCA TGCGATCCCG TGGTCCGGTC
CTGGACATCT GCCTGGCCGC CGCGGGAGTC GTTCTCGACC TGCTGATCTC GGGCAAGTCC
GGCCAGAGCG GCACGGCGCC CTGGTGGGTC GCGGGGGCCT TCGCGCTGCT CGCCGGGGTC
CCCCTGGGAT TCGTCCGGCG CCGCCCGTTC GCGGTCTGCC TCCACCAGGC GATCTTCCTG
GTCGTGTGCG ACCAGCTCGG CGCCCACACC TCCAACACGC TGCAGATCCT GCTCCCCGTC
GCGGTGGCGA CGCTCGCCTA CCGCGGCACC TGGCGATGGA TCGCCCCGGC CGCCGTCCTG
ACCGGCGTCG CCACGGCGAT CAACCTCGCC GACCCCGGGA TCGCCTTCAC CGCCGGCACC
TGGTACCTGC CGATCGGGAT GAGCGCCGTC CCGGTCGTCA TCGGCCGCTA CCTGCGCAGC
CCCATCGAGC CGGTGTCCGA GGTGGAGCGG CGTCCCGGCC TCGACCTGCT GCTCGCGGGC
GGCGGGGTGG CCTTCATGGT GCTCGACACC TGGACGGAGT GGGACAGCGG GCAGCTGCCG
GTCTGGGCGG CCGGCTGGTT CGCCATCGGC TGCGGGCTCA CCGCCGGCCT GGTGCGCAGC
CTGCCCGCCA CGGCGTTCGC GCTGCAGGCG CTGCTGGTGC TCCTGGCCGA CCAGAACGCG
GGGTTCGCCG CCAACTCGAT GCAGGGGCTG TTCCTGGTCA CGCTCGGCGC GTTCGCGATG
CGCGCCCCGT GGTCCTGGAC GGCCGCCGCC TACCTGATCG CCAGTGGCGT GACCGCGCTG
AACATCGTCG GAGGCGAGCT GTCACACGTC ACCCCGCCCC GGGTGGCCGC GCTGCTGGCG
ATGGTGGCGG CACCCATCGT CATCGGCCGC TACGTCGGCG TCCGCCGGGC CGCGGCGGAT
CTGGAGCTGG CCATGGCGGA GGAGGCCAGG CAGCTCACCG CCGAGCGCGC CCGGGCCGAC
CTGCTGGCCG AGCGCGAGCG CATCGCCCGC GACGTCCACG ACATCGTGGC CCACCATGTC
GGCGCCATGG TGCTGCGGGC GGGCGCCGCC CAGTACGCGG CGCCCTCCGG CCCGGTGGCC
GAGGCGCTGT CGGACATCCG GTCCACCGGC CACCAGGTGC TGGAGGACCT GCGCGGCCTG
CTCAACGTGC TGCGCGACCC GGATCTCGCC CACCTGCCCG TGGCCGACCC CGAGGAGGTG
GTGCGCGACG CGGTGGAGCG GATGAACGCG GCCGGGCTGA GGGTCGAGCT CCGCCTCGGC
CCGGAGGCCG AGCTCGCCCC CCTGGTGACC CGGGCCTCGG CCGCCCGGAT CGTCCAGGAG
GGCCTGACCA ACGTCCTCAA GCACGCCGGC CCCGGCACCT CGGCGGTCGT CGAGCTTGCG
GTGGCCGGCG GCTCGCTCGG GGTGAACGTG CTCAGCGGCG CGCCTCCCGG CCCCCGCGAC
GCGCTGCCCT CCTCCGGCCA GGGCATCGCG GGCATGCGGG AACGGGCCAG GGCGCTCGGC
GGAGACCTCT CCGCCGGTCC CGACGGGGCC GGCGGCTGGC GGCTGGCGGC GACGCTCCCC
CTGGAACGCG CCGACCGCGT GGGCGCGGAG ACCCCTTCGC GCAGGAGACT GCCCTGGTGG
CGTGAGGAAA GTGAGACCTC GTGA
|
|---|
| Protein sequence | MREPGPDPDT FFPMRSRGPV LDICLAAAGV VLDLLISGKS GQSGTAPWWV AGAFALLAGV
PLGFVRRRPF AVCLHQAIFL VVCDQLGAHT SNTLQILLPV AVATLAYRGT WRWIAPAAVL
TGVATAINLA DPGIAFTAGT WYLPIGMSAV PVVIGRYLRS PIEPVSEVER RPGLDLLLAG
GGVAFMVLDT WTEWDSGQLP VWAAGWFAIG CGLTAGLVRS LPATAFALQA LLVLLADQNA
GFAANSMQGL FLVTLGAFAM RAPWSWTAAA YLIASGVTAL NIVGGELSHV TPPRVAALLA
MVAAPIVIGR YVGVRRAAAD LELAMAEEAR QLTAERARAD LLAERERIAR DVHDIVAHHV
GAMVLRAGAA QYAAPSGPVA EALSDIRSTG HQVLEDLRGL LNVLRDPDLA HLPVADPEEV
VRDAVERMNA AGLRVELRLG PEAELAPLVT RASAARIVQE GLTNVLKHAG PGTSAVVELA
VAGGSLGVNV LSGAPPGPRD ALPSSGQGIA GMRERARALG GDLSAGPDGA GGWRLAATLP
LERADRVGAE TPSRRRLPWW REESETS
|
|---|
| |