Gene Sros_2637 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_2637 
Symbol 
ID8665923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp2872213 
End bp2872875 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content71% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003338347 
Protein GI271964151 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000568428 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGA CCAAGCGCCC GGCACTCAGC AGGCACACCC TGATCGAAAC AGCGCTTCGC 
CTGGTCGACC AGGTCGGCCT CGACGGACTG ACCGTGCGCA GGCTCGCCAC CGAGCTGGGT
GTGAAGTCCC CGGCGCTCTA CTGGCACATC CGCACCAAGC AGGAACTGCT CGACGCCATG
GCCGACACGA TCATCCTGGC CGCCGGAATG GGCCCGCCCC GCGAAGGCCA GAGCTGGCAG
GACTGGCTCA CCCGCCGAGC TCACGCCTAC CGGGCCTCGC TGCTCGCGCA CCGCGACGGT
GCCCGCCTGG TCGCCAACGC GGCCGGGCTG AGCCCGGCGA CGATCCGGCT GTTCGACGAG
GAGCTCACCG CGCTGGTCGG CTGCGGGTTC ACTCCGATAC TTGCGCTGCG CACGATCGGG
AGCTGCACCA GCTACATCAA CGGCTTCGTC CTCCGGGAGC AGGCCGAGCG GCCAGAGAGC
GCGGACGAGC CGTCACAGCG GCTCTCGGCG GTGGCCGCCC TGCTGGAGCG CGGAACTGAC
GCCACCTTGC TCCTGGCGAT CCGCGAAGGC GGCAGCTCGC TCGGGGACGA AGCCTTCGAC
CACGGCCTCC GCACCCTGAT CGACGGCACG GCCGCCGCGC TCCAGCGCTC CAGCGCCCCC
TGA
 
Protein sequence
MSETKRPALS RHTLIETALR LVDQVGLDGL TVRRLATELG VKSPALYWHI RTKQELLDAM 
ADTIILAAGM GPPREGQSWQ DWLTRRAHAY RASLLAHRDG ARLVANAAGL SPATIRLFDE
ELTALVGCGF TPILALRTIG SCTSYINGFV LREQAERPES ADEPSQRLSA VAALLERGTD
ATLLLAIREG GSSLGDEAFD HGLRTLIDGT AAALQRSSAP