Gene Sros_1876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1876 
Symbol 
ID8665154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1992327 
End bp1993790 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content76% 
IMG OID 
Productputative transcriptional regulator, PucR family 
Protein accessionYP_003337607 
Protein GI271963411 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTCTTG TGGCTGAACA CAAACTCACC GTCGAGGACC TGACCCGGTT CCCCGCCCTG 
CAACTGCGTG TCATGGCCGG TGAGGCCGGG CTGACGCGGT CGGTCTCCTG GGCGCACGTC
AGCGAGCTCG ACGACCCCAC CCCCTGGCTG CTCGGTGCCG AGGTCATCAT GACGACGGGC
ATCGCGATCC CCCGCTCCGC CGCGCGGCAG CGGGCCTACC TCGAACGGCT CGACGACGCC
GGGGTGTCCG GGCTGGCCCT GTCCGCGCAG CTCCACGTGC CGCCGCTGCA CGAGGCGTTC
TTCGCCGCGG CCGAGGAGCG GAGCATGCCG GTGCTCGAAG TGCCGCTGGC GGTGCCGTTC
ATCGCCATCG CCCAGGAGGT GGCGGCCGCC GTGCAGGAGG ACGCCCGGCA GCGGCTCGGC
GCGCAGCTCC AGGTCTTCGG CGCGCTGCGC TGGCTGGCCT CGGAGGACCT GGACACCGCG
ACGCTGTTCC GCAGGCTGGA GCGGCTGTCC GGCTACGAGG TGTACCTGTG CACGCCGCAG
GGGCGCCCGC TGCTGCCCGG CGTCCCGGCG CCCGATCCCG GGGTGCTTCC GGCGTCGGCG
GACGCTCCCC CGACGATCCC CGGCGGTTTC GCGCTGCCGG TGCCGGCGCC GGGCGGCCCC
GCGGGGTTCC TGGTCGCCTT CGAGAGGGAG GGCGCGCGGC CCGCCGGGCT GGCGGTGGTG
CAGCACATCG CCACCGTCGC CGCGCTGCGG GTGGCGATGG TCCGCCACGA GCGCGAGACG
CTGCGGCGCG AGGGCGCCGA GATCCTCGCC GAGCTCCTGC AGGACGTGCT CGACCCGGCC
ACGGCCCGGC GACGGCTGAT CCGGCTGGGG CTCCCCGCCG AGGAGCTCGT CCTGCTGACG
GTCCGCGGAG TGCCCGACGA CGCGCTGCTC CGCGCCCTCG ACGACCACCC CTGCCTCCTG
CTCCGCCAGG GCGACGACCG CCACGTGCTC GGCTCGGCGG AGCTGGGTAC GGCCGTCGCC
GCCCTGCCCG CCGCCGCGGC CGGGATGAGC AGGCCGTTCC CGGCCGGGAC GTCGCTGCGG
GTGGCCCAGC GGGAGGCGGC GTGGGCGGCG TCCCGGGCCG CCGAGTCCGG CCAGCCGCTG
ATCCGCTACG GCGACGACAC CACCGGAAGG TGGCTGCCGG AGGACCCATC GGTGCTGGCC
TCGCTGGTGG AGCACGTGCT CGGCGAGGTG CTCCGCTACG ACGCGGCCCA CGACTCCCGG
CTGCTGACCT CGGTCCGCAC GTGGATGGAG CGGGACCGGC GCACCGAGGA CGCGGCGGCG
GCGCTGCACG TACACCCCAA CACGCTGGCC TACCGGCTGC GCAGGTTCAC CGCGCTGACC
GGCCGCGACC TGTCGTCCAC CGGGGCGTTC GCCGAGGTCT GGCTGGCGGT CCGGGCCGCC
GGGCAGCTCG GCCTGACCGA CTGA
 
Protein sequence
MFLVAEHKLT VEDLTRFPAL QLRVMAGEAG LTRSVSWAHV SELDDPTPWL LGAEVIMTTG 
IAIPRSAARQ RAYLERLDDA GVSGLALSAQ LHVPPLHEAF FAAAEERSMP VLEVPLAVPF
IAIAQEVAAA VQEDARQRLG AQLQVFGALR WLASEDLDTA TLFRRLERLS GYEVYLCTPQ
GRPLLPGVPA PDPGVLPASA DAPPTIPGGF ALPVPAPGGP AGFLVAFERE GARPAGLAVV
QHIATVAALR VAMVRHERET LRREGAEILA ELLQDVLDPA TARRRLIRLG LPAEELVLLT
VRGVPDDALL RALDDHPCLL LRQGDDRHVL GSAELGTAVA ALPAAAAGMS RPFPAGTSLR
VAQREAAWAA SRAAESGQPL IRYGDDTTGR WLPEDPSVLA SLVEHVLGEV LRYDAAHDSR
LLTSVRTWME RDRRTEDAAA ALHVHPNTLA YRLRRFTALT GRDLSSTGAF AEVWLAVRAA
GQLGLTD