Gene Sros_1745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1745 
Symbol 
ID8665022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1861107 
End bp1861877 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content68% 
IMG OID 
Productefflux ABC transporter, lipoprotein translocase (LPT) family, ATP-binding protein 
Protein accessionYP_003337479 
Protein GI271963283 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.357481 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCATCA CCGGAGAGGT CGGCGCGTGG AACGCGCGGG GGGACGCGGC GGCCGCCGTG 
GTAGCCAGGG GCCTGACGAA GGTGTACGGC CAGGGGGATG CGGCCGTGCA CGCCCTCCGG
GGGGTGGACA TCTCTTTCGC GACGGGCGCC TTCACCGCGA TCATGGGTCC TTCCGGGTCG
GGTAAGTCCA CGCTGATGCA CTGTCTGGCG GGGCTGGACA CGGTCAGCGG GGGGCAGGTC
CACATCGGTG ACGTGGAGCT CACCGGGCTC AACGACAAGC AGCTCACCCT GCTGCGTCGT
GAGCGGATCG GTTTCATCTT CCAGGCGTTC AACCTGCTGC CGACGTTGAC CGCGGAGCAG
AACATCCGGC TGCCGCTGGA GATCGCGGGG CGTCAGGCCG ATCGGGATCT GTTCGATCGG
GTCGTGGAGA CGGTGGGTCT GCGTGACCGG CTGGGTCACA AGCCGGCTGA GCTGTCGGGC
GGGCAGCAGC AGCGGGTGGC GGTGGCCCGT GCTCTGATCA GCAAGCCGCA GGTGATCTTC
GCCGACGAGC CGACCGGCAA TCTGGACTCG CGTAGCGGTG CCGAGGTGCT GTCGTTCCTG
CGCACGTCGG TGCATGAACT GGGTCAGACG ATCGTGATGG TCACCCATGA CCCGGTCGCG
GCCTCCTATG CCGATCGGGT GGTCTTTCTC CGTGACGGTC TGCTGGTCAG CGAGCTGGTC
AGGCCGACGC CGCAGACCGT GCTCGACACG CTGATGAAGC TGGAGGCCTG A
 
Protein sequence
MTITGEVGAW NARGDAAAAV VARGLTKVYG QGDAAVHALR GVDISFATGA FTAIMGPSGS 
GKSTLMHCLA GLDTVSGGQV HIGDVELTGL NDKQLTLLRR ERIGFIFQAF NLLPTLTAEQ
NIRLPLEIAG RQADRDLFDR VVETVGLRDR LGHKPAELSG GQQQRVAVAR ALISKPQVIF
ADEPTGNLDS RSGAEVLSFL RTSVHELGQT IVMVTHDPVA ASYADRVVFL RDGLLVSELV
RPTPQTVLDT LMKLEA