Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_1514 |
Symbol | |
ID | 8664790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 1597795 |
End bp | 1599579 |
Gene Length | 1785 bp |
Protein Length | 594 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003337250 |
Protein GI | 271963054 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.283414 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00571716 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCTACT CCCCCGCACG ACCCCGCCGG CGGATCCTGC CCTACCTCCT GGCCGTGGTG CTGGCCATCG GGCTGATCGC AGGACTGCGC TGGTTCGTCG GCCGGAGCGG GGAGAGCGAG CCGAGCGCCT GCTCGGGCGA GTCGGCGAAG ATCCGGGTGG CGTCCTCGCA GGACAAGATC TGGATCCTGC GGGAGGTCGC CAAGGAGTAC AGCGGGCGGA CCGTGGCCGG GCGCTGCGCC GAGGTGGTCA TCGACGAGGC CAACTCGGGC ACCGCGATGC GGGCGCTGGC CAGGGGGTGG AAGGAGCAGA CCGACGGCGA GCGGCCGGAC GTGTGGTCCC CCGCCGCCTC CGCGTGGGTG ACGCTGCTGC GCCAGCAGGC CGGGGGCGCC GACGGCACCG TACCGGTCGC CGATGGGAAG CCGGTCCCGA TCGTGACCGC GCCGCTGGTC TTCGCGATGC CCAAGCCGAT GGCCGAGGCA CTGGGCTGGC CGGGCAAGGC GATCGGCTGG GCGGAGCTGG CCGGGCTGGC GGCCGACCCC AAGGGCTGGG CGAAGTACGG TCACCCCGAG TGGGGCCAGT TCAAGCTGGG CAAGACCAAC CCCAACTACT CGACCAGCGG CCTGAACGCC ACCATCGGCG CCTACTTCGC CGCGACCGGC ACCACCTCGG ACCTGACCGC CGGCGACATC GCCGACGCCA AGACCCGCGA GTTCGTCAAG GGCGTCGAGC AGTCGATCGT GCACTACGGT GACATCTCGA TGACCTTCCT GGGCAACCTG CTCCGCGCGG ACGACCGGGG CGAGTCCATG GCCTACATCT CCGCGATCAC CATCGAGGAG AACTCGGTCA CCGACTACAA CCGGGGCAAC CCGTCGGGCA ACCCGGCCAC GCTGGGCAAG CACGCCCCGC CGCGCACCCC GCTGGTGGCC GTCAACCCCA AGGAGGGCAC GCTCTTCTCC GACCATCCCT ACGTCCCGCT GACCTGGATG GACCCGGCCA GGAAGGCCGT CGCCGACGAC TTCCTGACCT ACCTGCACAG CGCCCCGGTG CAGGCGAGGT TCCAGTCGTA CGGCTACCGC GGCTTCGACG GCAAGCTCGG TCCCCAGGCC ACCAGGGAGA ACGGCGTCAT CCCCGACGCC ACGATCACCA CCCTCAACCT GCCCACCCCG ACCGTCCTGG ACAAGGTCCT GGGGAGCTGG TCGGAGCTGC GCAAGCGGGC CAACGTGCTG ATCGTGGTGG ACAAGTCAGG CTCGATGGAG GAGGAGGCTG CGGGCACCGG CGAGAGCCGC CTGGAGCTGG CCAAGAAGGC CGCGATCAAC GCGCTGCCGC AGTTCCGCGG GGACGACAAG GTCGGCCTGT GGGCCTTCTC CACCAGGCAG GACGGCGACA GGGACTACCG GGAGCTGGTC CCGATCGACT CGGTGTCGAA GATCGGCCCG GCGCTCCGCG ACGAGCTCGA CGGGCTGACC GCCGGGGGCG GGACCGGGCT CTACGACACC ACGCTCGCGG CCGTCGAGCG GATGCGCGGG GCCAGGGACG CCGGGGCGAT CAACGCGGTG GTCTTCCTCA CCGACGGCAA GAACGAGAAG ACCGGCGGCA GCGACCTGGA CAACCTGCTC GGCAAGCTCA ACCCCGACGT GCGCCTGTTC ACCATCGGAT ACGGCGAGGG CGCCGACCAG GGCGTGCTCA AGCGGATCGC CGAGGCCACC GACGGAGCCG CCTACGACTC CTCCCGGGCG GACACCATCG ACCAGGTCTT CACCAGCGTG ATCTCCAACT TCTGA
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Protein sequence | MAYSPARPRR RILPYLLAVV LAIGLIAGLR WFVGRSGESE PSACSGESAK IRVASSQDKI WILREVAKEY SGRTVAGRCA EVVIDEANSG TAMRALARGW KEQTDGERPD VWSPAASAWV TLLRQQAGGA DGTVPVADGK PVPIVTAPLV FAMPKPMAEA LGWPGKAIGW AELAGLAADP KGWAKYGHPE WGQFKLGKTN PNYSTSGLNA TIGAYFAATG TTSDLTAGDI ADAKTREFVK GVEQSIVHYG DISMTFLGNL LRADDRGESM AYISAITIEE NSVTDYNRGN PSGNPATLGK HAPPRTPLVA VNPKEGTLFS DHPYVPLTWM DPARKAVADD FLTYLHSAPV QARFQSYGYR GFDGKLGPQA TRENGVIPDA TITTLNLPTP TVLDKVLGSW SELRKRANVL IVVDKSGSME EEAAGTGESR LELAKKAAIN ALPQFRGDDK VGLWAFSTRQ DGDRDYRELV PIDSVSKIGP ALRDELDGLT AGGGTGLYDT TLAAVERMRG ARDAGAINAV VFLTDGKNEK TGGSDLDNLL GKLNPDVRLF TIGYGEGADQ GVLKRIAEAT DGAAYDSSRA DTIDQVFTSV ISNF
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