Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_1513 |
Symbol | |
ID | 8664789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 1595905 |
End bp | 1597722 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003337249 |
Protein GI | 271963053 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00594342 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGTACCAGC AGCCGCAGCG ACCGCGCAGG AACTTCGCTC CCTTCATCAT CGCGATCATT CTCGCCGGGG CGTTGATCGT CGGTCTGCGG CTGTACGTCG GGAGCGCCGA GCCGGAGCGG CCGCGGAACG CCAAGCAGAC CACGGCCTGC GGCGCCGGCG GGGTCACCCT GACCGTGGCG GCGTCGTCGG AGAAGGCCGA GCTGCTGCGG ACGGTCGCGG CCGGCTACAA CGGCAGGAAG GTCGGCGAGC GCTGCGCCGA CGTGGTCGTC GTGACCAAGG CCAGCGGCGG CGCGATGCAG GCGCTGGCCC GCGGCTGGGA CGAGCGCCAG GACGGCCCGC GGCCGGATGT CTGGTCCCCG GCGAGCAGCG GCTGGGTCAC CCTGCTCCAG CAGCGCGCCC AGGGAAACGA CACCGGCTCC CTGGTCGCCG CGGAGAACCC GTCGATCGCC AAGACCCCCC TGGTCATCGC GATGCCCAAG CCGATGGCCG AGGCCCTGGG CTGGCCGGGC AAGAAGCTCG GCTGGGCCGA CCTGCTCGAC CTGTCGGCCG GCTCCTGGGC CAAGTACGAC CATCCGGAGT GGGGCGACTT CCGCCTGGGG AAGACCAACC CCAATTTCTC GACCAGCGGC CTGAACGCCA CCGTCGGCGC CTACTTCGCG GCCACCGGCC TGTCGGGCGA CCTGTCGGAG AAGAACGTGG CCGATCCCAG GACGCGGGAC TTCGTCCAGG GCGTGGAGCG CTCGATCGTG CACTACGGCG ACACGACACT GACGTTCCTG TCGAACCTGC AGCGGGCCGA CGACGCGGGG GCGGGCCTGA GCTACATCTC CGCGGTGGCC GTGGAGGAGA AGTCGGTCTG GGACTACAAC CAGGGCAACC CGACGGGCGA CCCGAAGACG CTGGGCAAGC ACGGCAAGCC CAAGGTGCCG CTGGTGGCGA TCTACCCCAA GGAGGGCACG CTCTACTCCG ACAACCCCTA CGCCGTGCTG ACCGCGCCGT GGGTGGACGA CGCCAAGCGG CAGGTGGCCG CCGACTTCCT GGCCCACCTG CAGGCCCCGG AGCAGCAGAG GCGCTTCGCC GACTTCGCCT TCCGGTCGCA CGAGGGGAAG GCGGGCAAGC TGATCACCGA GGCGAACGGC CTGCTGCCCG CCGAGCCCAG GACCGCGCTC AGCCCGCCCG CCCCCAACGT GCTGGACAAG GTGCTCTCCA GCTGGGCCGA CCTGCGCAAG CCCGCCAACG TGCTCATGGT GATCGACGTG TCCGGCTCGA TGGGCGCCGG CGTGCCGGAC ACCGGCAGGA GCAAGCTGGA CCTGGCCAAG CAGGCCGCGA TCAACGCGCT GCCCCAGTTC GGCCCGCACG ACAAGGTCGG CCTGTGGATG TTCTCCACCA AGCGGGACGG TGAGAAGGAC CATCTGGAGC TGGCCCCGCT GGACACCGTG GACGCCGCCC AGCGCAAGAC CCTGCGTACC CGCCTCGACG GCCTGACCCC CGACGGCGGG ACCGGCCTCT ACGACACCGC GCTCGCCGCC TACCAGCACG TGCGCGACCG GCACAGCGGA GAGGCGATCA ACGCGGTGAT CTTCCTGACC GACGGCAAGA ACGAGGACAA CAACAGCCTG TCGCTGGAGA ACCTGCTGCC CGATTTGCGC GCCGAGTCCG CCGAGGAGTC GGTGCGGATG TTCACGATCG CCTACGGCCA GGACGCCGAC CTCGGCGTGC TCAAGCAGAT CTCCGAGACG ACCAACGCGG CCGCCTACGA CTCCCGCGAG TCGGGAAGTA TCGACCAGGT GTTCACCGCG GTGGTATCCA ACTTCTGA
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Protein sequence | MYQQPQRPRR NFAPFIIAII LAGALIVGLR LYVGSAEPER PRNAKQTTAC GAGGVTLTVA ASSEKAELLR TVAAGYNGRK VGERCADVVV VTKASGGAMQ ALARGWDERQ DGPRPDVWSP ASSGWVTLLQ QRAQGNDTGS LVAAENPSIA KTPLVIAMPK PMAEALGWPG KKLGWADLLD LSAGSWAKYD HPEWGDFRLG KTNPNFSTSG LNATVGAYFA ATGLSGDLSE KNVADPRTRD FVQGVERSIV HYGDTTLTFL SNLQRADDAG AGLSYISAVA VEEKSVWDYN QGNPTGDPKT LGKHGKPKVP LVAIYPKEGT LYSDNPYAVL TAPWVDDAKR QVAADFLAHL QAPEQQRRFA DFAFRSHEGK AGKLITEANG LLPAEPRTAL SPPAPNVLDK VLSSWADLRK PANVLMVIDV SGSMGAGVPD TGRSKLDLAK QAAINALPQF GPHDKVGLWM FSTKRDGEKD HLELAPLDTV DAAQRKTLRT RLDGLTPDGG TGLYDTALAA YQHVRDRHSG EAINAVIFLT DGKNEDNNSL SLENLLPDLR AESAEESVRM FTIAYGQDAD LGVLKQISET TNAAAYDSRE SGSIDQVFTA VVSNF
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