Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_1377 |
Symbol | |
ID | 8664652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 1432013 |
End bp | 1433767 |
Gene Length | 1755 bp |
Protein Length | 584 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003337115 |
Protein GI | 271962919 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.199891 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCCCTCTT CCGGTCGACA CCGTGTGGCC GCCGGCGCCG AGAGGCGCCG GCGGCAGGTG CATCTGCGTC TGTCGCTGGC GGCGGTCGCG GTCGCGGTCG CCCTGACCGG GAGCCTGGTC CTGGCGCTCG GCCCGGCGGA CGGCCGGTGC TCACCCCGGG ACCCGGTGCT GGTCGGCGTC GCCGCCGCGG TGGACATCGC GCCGACCGTC ATGGAGGCCG CAGGCCGGTT CAACCGGAGC GGGACCGGCG TCGACGGCCG GTGCGTGCTG GTCCAGGTCA TGGAGCAGCC GCCCGCCACC GTGCTGCGCA CCCTGATCGG CGGCACCGCC GGGGTGCTCA GTGAGCGCCC CGACGGCTGG ATCACCGACT CCTCGGCCTG GATCCGGCTC GCGCGCAAGC AGGGCGCCGG GAACCTGGCG GGCACCGAGA CCGTGATGGC CACCTCGCCC CTGGTCTTCG CCACCCGCAA GTCCCTGGCC CAGCGCTTCG CGGTCGGCAA GACCGACATG AACTGGCGGA TGGTCTTCCC GGCGACCACC CGGGGCCGGA TCCGGCCCAA CGCCGACGAG CCCGACGTGG TCCGCGTCCC GGACCCCTCG CTCGCCGGGG CCGGGATCGC CACGGTGGCC GCGGCCAGGG ACGTCGTCGG CACCGGGGCG GAGGCCGACC GCTCGCTCAC CGCGTTCGTC CGCTGGGCAC AGGCGGGTTC GGCGCCCGAC TACCGGAGCA TGCTCGCCGC GGTCGACGAC CGCTCCTTCT GGCAGCGCCC GGTGGTGATC GTCCCCGAGC AGTCGGTGTG GACGCACAAC CGCCTGCCGT CCGGCGACCC GGTGGTCGCG CTCCATCCCC GCGAGGGGAC CATCAACCTG GACTACCCCT ACGTGGTCAC CTCCGCGGAC AGCACGAAGG CGAGCGGATC GCGGGCCTTC GCCACCTGGC TGCGCTCCCC GGAGACCCAG GACGCCGTAC GGCGGGCGGG CTTCCGCTCG GCGGACGGCA CCCAGGGGCC GTACTCACCC GGACCCGAGA TCCCCACCGA GGCGCCCCGC ACCCGGCCGG CCATCCTGCC CGCGATGATC GACGAGGCGC TGGAGGCCTG GAGCAGGCTG GCCCCGCCGA CCAACATCCT GGTCCTGGCC GACACCGGCA AGCACATGGC CCGGCCGATC AAGGAGGAGA AGGGCAGGAC CAAGCTCACC GTCGCGCTCG AAGCGGCCAG GCTGGGCCTG CAGCTCTTCC CCAACTCCAC CCACATGGGC ATGTGGGAGT TCGCCGCGGC CAAGGGCGGG GACCACCGCG AGCGGGTACG GATCGGCCCG ATCCTGGAGC CCGACGGGGG CCAGGTCATC CGGCGCAGCC GCCTGGAGGA GCTGACCCGC ACCCTGCGCG CCGACCCGAA GCTGTCCAGC TCCCTCTACG ACTCCGTCCT CGCCGGGTTC CGCGAGGTGA CCGACTCCTA CGACGAGACG ATGAACAACA CCCTGCTCGT CATCACCGCG GGCAGGGACG ACGGCAAGGG GCTGTCTAGC GGCGAACTGG CGGAGCGGCT CAGAGACGAG TGGGACCCGG AGCATCCGGT CCAGATCGTC GTGCTGGCCT TCGGCGACGA CCTGGACCGT GCCGCCCTCG GGCAGGTGGC GAGCATCACC AACGGCTCCC TGCACATCGC CCAGGAGCCC AACGAGATCA TCGAGGTCTT CCTGTCCGCC CTGGCCCGCC GCCTGTGCCA CCCCACGTGC CCCAAGGCCC CGTGA
|
Protein sequence | MPSSGRHRVA AGAERRRRQV HLRLSLAAVA VAVALTGSLV LALGPADGRC SPRDPVLVGV AAAVDIAPTV MEAAGRFNRS GTGVDGRCVL VQVMEQPPAT VLRTLIGGTA GVLSERPDGW ITDSSAWIRL ARKQGAGNLA GTETVMATSP LVFATRKSLA QRFAVGKTDM NWRMVFPATT RGRIRPNADE PDVVRVPDPS LAGAGIATVA AARDVVGTGA EADRSLTAFV RWAQAGSAPD YRSMLAAVDD RSFWQRPVVI VPEQSVWTHN RLPSGDPVVA LHPREGTINL DYPYVVTSAD STKASGSRAF ATWLRSPETQ DAVRRAGFRS ADGTQGPYSP GPEIPTEAPR TRPAILPAMI DEALEAWSRL APPTNILVLA DTGKHMARPI KEEKGRTKLT VALEAARLGL QLFPNSTHMG MWEFAAAKGG DHRERVRIGP ILEPDGGQVI RRSRLEELTR TLRADPKLSS SLYDSVLAGF REVTDSYDET MNNTLLVITA GRDDGKGLSS GELAERLRDE WDPEHPVQIV VLAFGDDLDR AALGQVASIT NGSLHIAQEP NEIIEVFLSA LARRLCHPTC PKAP
|
| |