Gene Sros_1295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1295 
Symbol 
ID8664570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1336763 
End bp1339534 
Gene Length2772 bp 
Protein Length923 aa 
Translation table11 
GC content73% 
IMG OID 
Productglucan 1,4-beta-glucosidase 
Protein accessionYP_003337036 
Protein GI271962840 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGC CGTTCCGTGA CCCGGAGCTC CCACTCGCCC GGCGCATCGC CGACCTTCAA 
AGCAGACTGA CCTTGCCGGA GAAGCTCGGC CTGCTGCACC AGTACCACGC TCCGGTCGAG
CGGCTCGGCC TGGGCGCCTT CCGCACCGGC ACCGAGGCCC TGCACGGCCT GGCCTGGCTG
GGGCCGGCGA CGGTCTTCCC GCAGGCGGTC GGGCTGGCCA GCACCTGGGA CCCCGAGCTG
GTCAGGCGGG TCGGCGAGGC GACGAGCGAC GAGGTCCTGG CCTTCCACCA CAAGGATCCG
GCCGGGGCCG GGCGCAACGT GTGGGCCCCG GTGGTCAACC CCCTCAGGGA CCCGCGCTGG
GGCCGCAACG AGGAGGGCTA CTCCGAGGAT CCGTGGCTGA CCGGGGTCAT GGCCACGGCG
TACGCCTCCG GCCTTCGTGG GAGCGATCCC ACACTGCTCA AGACCGCCCC CACCCTCAAG
CACTTCCTCG GCTACAACAA CGAGACCGAC CGCTGCGTCA CCTCCAGCAA CCTGCCGCCC
CGGGTGCTGC ACGAGTACGA ACTGCCCGCC TACCGGCCCG CCCTGGAGCA CGGCGCCGCG
GTCGCCGTGA TGCCCTCCTA CAACCTGGTC AACGGCCGTC CCGCGCACCT CAGCCCGCTG
ATCAACGAGG TGCTGCGCGT CTGGGCCTCC GACGACCTCC TGGTGGTCAG CGACGCCTAC
GCGCCCGGCA ACCTCACCGG CCTGCAGGCC TACCACGACG ATCTCCCCGA GGCCTACGCC
CACGCGATCA AGGCCGGGCT CGACAGCTTC ACCCAGGACG ACGACCGGGC CGAGGCCACC
CTCGGGCACA TCCGGGAGGC GCTGGAGCGC GGCCTGCTCA CCGAGGCGGA CGTCGACGTG
GCGGTACGGC ACGCGCTGTC GATCCGCTTC CGGCTCGGCG AGTTCGACCC CGCCACGCCG
TACGACGACA TCACCGAGGA GGTCGTCAAC TGCCCCGAGC ACCAGGCGCT GGCCCGCGAG
GCCGCCCGGC GCTCGATCGT GCTCCTGCGC AACGACGGCA TCCTCCCGCT GACCTCGGCC
GGCAGGATCG CGGTCATCGG TCAGCTCGGC GACACGCTGA TGGAGGACTG GTACTCCGGG
ACGCTCCCGT ACGCCGTCAC GGCCCGCGCC GGGCTGGCCG AGCGGTGCGA GACCGTGTTC
TGCGAGGCCG TGGACCGGGT CACGCTGGCG GTCGACGGCG CCCCCGTCGT CGCCGGCCTG
GACGGCGGGG CGCTCCGGCT GGGGACGGAG GCCGACCGCT TCGACCTCTT CGACTGGGGC
GGCGGGTCGT ACGCGCTGCG GGCCGTGGCG ACCGGGCGCC ACCTGTCGGT GGACGACGAC
GGCCTGCTGG TCAACGACCA GCCGGGACCC AACGGCTGGG AGGTGCGCCA GACCTTCAGG
ATGGAGGACC GGCCGCGCGG GGCGCTGGCC CTCAGGCACA TCTCCACCGG CCGCTACGTC
GCGCTGGACG GCGAGGTGTT CCGGCTGGTC GACGACGCCG ACGCGGCGGT CTGGCTGACC
ATGGAGCTCG TCGTCAGCGG AGCGGAGGCG GCCGCCGCCC TCGCCGCGAC GGCGGACGTG
GCCGTGGTGG TGGTCGGCGA CCATCCGCTG GTCAACGGCA GGGAGACCGA GGACCGGCTC
GACCTGGCGC TGCCCGCCGC CCAGGAGGCC GTGGTCCGGG CCGTGCGCGC GGCCAACCCG
CGGACCGTCA TGGTGATCAG CAGCGGCTAC CCGGTGACCT GGGCCGACGA GGACCTGCCC
GCGGTGCTGT GGTCCTCGCA CGGCGGCCAG GAGTACGGCC ACGCGCTGGC CGAGGTGCTG
TTCGGCGACG CCGACCCCGA GGGGCGCCTC ACCCAGACGT GGTACCGCTC GGCGTCCGAG
CTGCCCGACC TGCTCGACTA CGACATCATC GCCGCCGACG CGACCTACCA GTACTACCGG
GGCACCCCGC TCTACCCCTT CGGCCACGGT CTCAGCTACA CCGGCTTCGA CTACACCGGC
CTGACCGTCG CGGTGGCGGA CGGCACGGTC ACCGTCTCGG CCACCGTCAC CAACACCGGG
TCCCGCCCCG GGGTCGAGGT CGCCCAGATC TACACCCACC AGCAGCGCTC ACGGGTCAAG
CAGCCGCTGC GCCGCCTGCG CGGCTTCGCC AAGGTACGGC TCGCGCCGGG GGAGAGCGGC
ACGATCACCT CGGTCCTCGA CATCCGCGAC CTGGCCTTCT GGGACGTGAC GAGGGGCCGG
CCCGTCGTCG AGGACGCGCC CCACAAGATC ATGATCGGCC GCTCCGCCGG CGACATCCGC
CTGTGCGCCG CCTTCCACGT CGACGGCGAG CACATCCCGC CCCGCGCCGC CCTGGCGGGT
CCGATCTCCG CGGTGGACCA CGACGAGTAC GACGCGGTGA CGTTCGTGGA CGCGGCCAAG
GTCTCCGGCG ACGCCGTACG GTCCACCGCC GAGGGCGGGT GGATCCTGTT CCGCTCGGTC
GACCTCGGGA CCGGAGCGGC CTCCTGCGCG GTCCGTGCGG CCGGCACGGA AGGCGGCGTG
ATCACCTTGC GGCTGGACGA CCCCCTCTAC GGCCCGGTCG TCGGCGCCCT TCCCGTCCCC
CGGGCCGGCC GCCACGACCT CGCCGAGGTC CGTGCCGGGC TTGCGGAGGC CGGTGGAGTC
CACGATCTTT ATGTGGTGTT CGAGAATGCG GGAATCACCC TGGCCACCCT CGCCTTCGAG
GGCGTCGCGT GA
 
Protein sequence
MNQPFRDPEL PLARRIADLQ SRLTLPEKLG LLHQYHAPVE RLGLGAFRTG TEALHGLAWL 
GPATVFPQAV GLASTWDPEL VRRVGEATSD EVLAFHHKDP AGAGRNVWAP VVNPLRDPRW
GRNEEGYSED PWLTGVMATA YASGLRGSDP TLLKTAPTLK HFLGYNNETD RCVTSSNLPP
RVLHEYELPA YRPALEHGAA VAVMPSYNLV NGRPAHLSPL INEVLRVWAS DDLLVVSDAY
APGNLTGLQA YHDDLPEAYA HAIKAGLDSF TQDDDRAEAT LGHIREALER GLLTEADVDV
AVRHALSIRF RLGEFDPATP YDDITEEVVN CPEHQALARE AARRSIVLLR NDGILPLTSA
GRIAVIGQLG DTLMEDWYSG TLPYAVTARA GLAERCETVF CEAVDRVTLA VDGAPVVAGL
DGGALRLGTE ADRFDLFDWG GGSYALRAVA TGRHLSVDDD GLLVNDQPGP NGWEVRQTFR
MEDRPRGALA LRHISTGRYV ALDGEVFRLV DDADAAVWLT MELVVSGAEA AAALAATADV
AVVVVGDHPL VNGRETEDRL DLALPAAQEA VVRAVRAANP RTVMVISSGY PVTWADEDLP
AVLWSSHGGQ EYGHALAEVL FGDADPEGRL TQTWYRSASE LPDLLDYDII AADATYQYYR
GTPLYPFGHG LSYTGFDYTG LTVAVADGTV TVSATVTNTG SRPGVEVAQI YTHQQRSRVK
QPLRRLRGFA KVRLAPGESG TITSVLDIRD LAFWDVTRGR PVVEDAPHKI MIGRSAGDIR
LCAAFHVDGE HIPPRAALAG PISAVDHDEY DAVTFVDAAK VSGDAVRSTA EGGWILFRSV
DLGTGAASCA VRAAGTEGGV ITLRLDDPLY GPVVGALPVP RAGRHDLAEV RAGLAEAGGV
HDLYVVFENA GITLATLAFE GVA