Gene Sros_1276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1276 
Symbol 
ID8664551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1313310 
End bp1314761 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content70% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003337017 
Protein GI271962821 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCTGC ATGTAGTGTT GGCCGACATG ATCCCCTCCT CCAACGACGG GCGCTGGGAC 
GCGCGCCTCT GGGCCGCGCT CACGGTGCTC TGCGCTGTCG TGTTCCTCGA CGCTCTCGAC
GTCTCGATGG TGGGTGTCGC CCTGCCGTCC ATCCAGGCGG ACCTCGGGCT GTCCACCTCC
TCGCTGCAGT GGGTGGTCAG CGGCTACGTG CTCGGATACG GCGGACTGCT CCTGCTCGGG
GGCCGCACCG CCGACCTGCT CGGGCGACGC AGGGTATTCC TGGTCGCGCT GGCGGTCTTC
GCCGTGGCCT CTCTGCTCGG CGGCCTGGTC AGCGACGGCA CGCTGCTGAT CGCCGCCCGC
TTCGTCAAGG GAATCAGCGC CGCCTTCACC GCCCCCGCCG CGCTGTCCAT CATCACCACG
ACCTTCGCCG AGGGCCCGGC CCGCAACAGG GCCCTCAGCA TCTTCACCGC CTCCGGCGCC
AGCGGCTTCT CCCTGGGCCT GGTCATCTCG GGATTCCTGA CCGAGCTCGG CTGGCGCTGG
ACGTTCCTCA TGCCGGTCCC CGTCGCGATC ATCGCCCTGG TCGCGGCCCT GAAGTTCCTG
CCCAAGCGCC GCGAGGAGAG GGCCGAGGGC GGCTACGACC TCATCGGCGC GACGACCATC
ACCGGCTCGA TGCTGCTGCT GGTGTTCGCC GTGGTGGAGG CCCCCGAGGT GGGCTGGGGG
TCGGTCCGCA CGATCGCCAC CCTGGCCGCC GCCGTGGCCC TGCTGGTCGT GTTCGTGCTG
GCCGAGCAGA GGGTCAAGCA CCCGCTGGTA CGGCTCGGCA TCCTGCGCTC GGGGCCGATC
GTCCGGGCCA ACCTCGGCCT GGTGATCCTG TTCGGCTCCT ACGTCGGCTT CCAGTTCGTG
GCCATGCAGT ACTTCCAGAA CTTCCTGCAC TGGTCGGCGC TGGAGACCGC CCTGGCGTTC
CTGCCCGCCG GGCTGCTGGT GGCCGTGACG TCCACCAAGA TGGGCAGCCT GGCCGACCGG
TTCGGCACCG CCAGGCTGAT CGTGATCGGC TCGGCCGCGC TGGCCGCCGG ATACGCCTTC
TTCCTGCGGC TGGACGGCGC CCCCAGCCTG GCCACCCTCA TCATCCCCGG CATGGTCCTG
CTGGGCATCG CCTTCGCCCT GTCCTTCCCG TCACTGAACA TCCAGGCCAC CAACGGCGTC
GCGGACGACG AGCAGGGGCT GGCCTCCGGC CTGCTCAACA CCTCCGGGCA GGTCGGCGGC
GCGGTCGTGC TGGCCGTCGT GACGGCGGTG CTCACCTCGA CCACGAGCGC CGACCCGATC
GACGGCTTCC GCGCCGCGAT CACGGTCTCC GGCATCCTCG GCCTGGTCGG CCTGGTGATC
GCCCTCACCG GTCTCCGCCG TCCCCGTACG GCCGTCGCCA TCGAGGACGA GAAGGTGCTG
GAGACCGTCT GA
 
Protein sequence
MHLHVVLADM IPSSNDGRWD ARLWAALTVL CAVVFLDALD VSMVGVALPS IQADLGLSTS 
SLQWVVSGYV LGYGGLLLLG GRTADLLGRR RVFLVALAVF AVASLLGGLV SDGTLLIAAR
FVKGISAAFT APAALSIITT TFAEGPARNR ALSIFTASGA SGFSLGLVIS GFLTELGWRW
TFLMPVPVAI IALVAALKFL PKRREERAEG GYDLIGATTI TGSMLLLVFA VVEAPEVGWG
SVRTIATLAA AVALLVVFVL AEQRVKHPLV RLGILRSGPI VRANLGLVIL FGSYVGFQFV
AMQYFQNFLH WSALETALAF LPAGLLVAVT STKMGSLADR FGTARLIVIG SAALAAGYAF
FLRLDGAPSL ATLIIPGMVL LGIAFALSFP SLNIQATNGV ADDEQGLASG LLNTSGQVGG
AVVLAVVTAV LTSTTSADPI DGFRAAITVS GILGLVGLVI ALTGLRRPRT AVAIEDEKVL
ETV