Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_0480 |
Symbol | |
ID | 8663749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 481562 |
End bp | 482875 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | type II secretion system protein E |
Protein accession | YP_003336249 |
Protein GI | 271962053 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACCGGG GCGGCGTCGC CACGGCGGTC TCACCCGAGC TGGTGGAGGC GGTCCGGGTC CGGCTGGCCC GGAGCGGAGT CGAGCCCAGC GCCGCGCATG TCGCGGTCGC CCTCCGAGCG GAGCGGGCGG TGCTCGGCGA CGCGGAGATC CTGGCGGTGG CCCGCGTCCT GTGCGCCGAC CTGATCGGAG CCGGTCCGCT GGAGCCGTTG CTGGCCGAGC CCGAGGTCAC CGACGTGCTG GTGAACGGCC CTCGCGAGGT GTGGGTCGAC GACGGACGCG GCCTGCGCCG GACCTCGGTC GTGTTCCCCG ACGAAGACGC GGTCCGGCGG CTCGCCCAGC GGCTTGCCTC CGCCGCCGGC AGGCGCCTGG ACGACGCGTG CCCCTACGTC GATGCCCGCC TGGCCGGAGG CGTCCGGCTC CACGCCGTCC TGCCACCCGT GGCGGCCGGT GGCACCTGCC TGTCCCTGCG GCTCCCGCCC CGCCGCACCT TCACCCTCCC CGATCTGGTC GGAGCAGGCA CGATCAGGGC CGACGCCGTC CCCGTGCTCA CCGCGGTGAT CGAGTCAAGG CTCGCCTTCC TCGTCACCGG CGGCACGGGC ACGGGGAAGA CCACTCTGCT GTCGGCCCTG CTGTCCCTGG CCGATCCCGG CGACCGGCTG CTGCTGGTCG AGGACTCAGC CGAGCTGCGA CCACTGCACC CTCACGTCGT GCGCTTGGAG TCACGTCCGG CCAACCTTGA GGGAGCCGGT GGCGTGTGCC TGCGTGACCT CGTCCGTCAG GCCCTGCGCA TGCGCCCGGA CCGTCTGGTC GTCGGCGAAG TCCGAGGCGC CGAGGTCGTT GATCTCCTCG CCGCTCTGAA CACCGGCCAT GAAGGTGGTT GCGGCACCCT CCACGCCAAC ACCGCGGCCG ATGTGCCGCC TCGCCTGGAG GCCCTGGCAT GCGCCGCCGG TCTCAGCCGC GAGGCGGTTC ACAGTCAGAT CGCCGCCGCG CTGGACGTCG TCATCCACCT CGTCCGTGAC CATGCCGGCG GCTGCCGCCG GGTGGCCGAG ATCTGCATGA TGATCCGTCG GCCCTCAGGT CTGGTCGATG CCGAACCCGC CCTCACCTTC TCCCCGGACG GCCGTGTGAC CGCCGGCCCG GGCCTCCCCG CCCTCACGGC CCGGGCCCCC GGCCTCTCCA CCTTCCCCGG TGTCGCGCGC AGGCCGTACG GCCCCGCCCG GCTCGACCGT TACCGCGGGC CGCCGGAAGG CCGCGCCGTG ACCCGCCGAT CATCGGAGGG CTCTGCCCCG GATGCCCTGG GAGCACTGCC ATGA
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Protein sequence | MNRGGVATAV SPELVEAVRV RLARSGVEPS AAHVAVALRA ERAVLGDAEI LAVARVLCAD LIGAGPLEPL LAEPEVTDVL VNGPREVWVD DGRGLRRTSV VFPDEDAVRR LAQRLASAAG RRLDDACPYV DARLAGGVRL HAVLPPVAAG GTCLSLRLPP RRTFTLPDLV GAGTIRADAV PVLTAVIESR LAFLVTGGTG TGKTTLLSAL LSLADPGDRL LLVEDSAELR PLHPHVVRLE SRPANLEGAG GVCLRDLVRQ ALRMRPDRLV VGEVRGAEVV DLLAALNTGH EGGCGTLHAN TAADVPPRLE ALACAAGLSR EAVHSQIAAA LDVVIHLVRD HAGGCRRVAE ICMMIRRPSG LVDAEPALTF SPDGRVTAGP GLPALTARAP GLSTFPGVAR RPYGPARLDR YRGPPEGRAV TRRSSEGSAP DALGALP
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