Gene Sros_0418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0418 
Symbol 
ID8663686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp418442 
End bp419701 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003336190 
Protein GI271961994 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.44044 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGCA GGATCCTCCC GCCCTCCGGC CCGCCACGGG TTCTCGCCCT GGCGCAGCTG 
ACCAACGCCT TCGGCGACGG CGCGTACTAC GTCTGCTCGG CGCTGTACTT CACCCGGATC
GTGGGGCTCT CCCCGACCCA GGTCGGCTTC GCCCTGACTC TCGGCTGGGC CCTCGGGTCC
GTGGCGGGGG TCCCGCTCGG GCATCTCGCC GACCGCTGGG GCGCCCGGGG CGCGGCCGCG
CTGCTGGCCG TCGCGACCGG CGTGGCGGCC GGCTCGTTCC TGTTCGTCAC GTCCTTCGCC
CTGTTCGTCC TGGCCGCCTG CCTCTACACC TGCTGCCAGT GCGGGCTCGG GGCCGCCCGG
CAGGCGCTGC TCGCCGGGCT GGTGGACAAG GCGCGGCGGA CCGAGGTCCG GGCCCACCTG
CAGGCGACGG TGAACGCGGG GCTGGCGATC GGCGCGGCGC TCGGCGGGCT GGCCCTGCAC
CTCGACACCC GGCAGGCGTA TCTGGCGGTC TTCGCGATGG ACGCCCTGAG CTTCCTGGCC
TCCGCCCTGG TGCTGCTCCG GCTCCCGGCC GTGCCGCCCT CGCCCCCCGC CCCGGCCGGT
GAGCCGGTCC TGGCGGTGCT CCGGGACAGG CCCTATGCCC TGATCTCCCT CCTCAACATG
ATCATGCTGC TCCACATGCC CCTCCTCAGC CTGGTGATCC CGCTGTGGAT CGTCCAGCGG
ACCGAGGCGC CGAGCTGGAC GGTCTCGGCG CTGCTGGTGC TCAACACGCT GAGCGTGGTG
CTCTTCCAGG TGCGGGTGGC CCGGCGGGTG ACCGGCCTGG GCACCGCCTC CCGGTCCGTA
CGGCAGGCGG GCCTGGTGAT GCTCGCCTCG TGCGCGGTGT TCGCGCTGTC GGCGGCCGGA
TCCTCGGCAT GGGCCGCCGG AGCCGCCCTG CTCGTGGCCG CCTGCCTGCA GGTGCTCGGC
GAGATGATGC ATGCCTCCGG TGCCTGGGAG GTCGGGTTCG ACCTGGCCCC GCAGGACAGG
CAGGGCCAGT ACCAGGGTTT CTTCGGCGCG GGCACGGCGG TCGCGAGGAT GCTCGGTCCC
CTGCTGCTCA CCACATTGAT CATCACCTGG GGTCCGCCGG GCTGGCTCCT GCTGGGCGGC
CTGTTCCTGC TGGCCGGCTC CGCCATGGGG CCGGCCGTAC GCTGGGCGGA ACGGACCCGG
GCGGCGGGTT CGCCGAGACC CGCGGTGGCA CCTCCGCTTC CACAAGAATC AGCCTCTTGA
 
Protein sequence
MSSRILPPSG PPRVLALAQL TNAFGDGAYY VCSALYFTRI VGLSPTQVGF ALTLGWALGS 
VAGVPLGHLA DRWGARGAAA LLAVATGVAA GSFLFVTSFA LFVLAACLYT CCQCGLGAAR
QALLAGLVDK ARRTEVRAHL QATVNAGLAI GAALGGLALH LDTRQAYLAV FAMDALSFLA
SALVLLRLPA VPPSPPAPAG EPVLAVLRDR PYALISLLNM IMLLHMPLLS LVIPLWIVQR
TEAPSWTVSA LLVLNTLSVV LFQVRVARRV TGLGTASRSV RQAGLVMLAS CAVFALSAAG
SSAWAAGAAL LVAACLQVLG EMMHASGAWE VGFDLAPQDR QGQYQGFFGA GTAVARMLGP
LLLTTLIITW GPPGWLLLGG LFLLAGSAMG PAVRWAERTR AAGSPRPAVA PPLPQESAS