Gene Sros_0228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0228 
Symbol 
ID8663495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp220543 
End bp221715 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003336011 
Protein GI271961815 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCA CCCTTGGCGC GGCCGTACTG GCACTGGCGA TGGCCGCGCC CGCGGTGGCC 
GACCCCTGGC GCCCCGGGTT CGACCGCGCC ACGCTGACCG GGTTCGCCTC CCTGCCCGCC
CAGACGTTCG TGCCCGGAAG CGAGCCGTCG GGGGCCCAGC TCGGAACGGC GCCGGTCAAC
GGGGTGACCC CGCCCTTCGC CGGGCAGCCG GTGCAGGGCT TCAGCGGCAT CGTACGGCGG
CACGACGGCA CCTTCGACGC GCTGTCCGAC AACGGCTACG GCGCCAAGGC CAACAGCGCC
GACTTCCTGC TGCGGGTGCA TCGGATCAGG CCCGACTTCC GGCGGGGCAA GGTCGAGGTG
CTCGGCGGGT TCGACCTGAG CGACCCCGAC GGTCACGTGA CCTGGCCGCT GACCCGGACC
GACCGGAAGC TGACCGGCGC CGACTTCGAC GTGGAGTCGA TCGTGCGGAC CCTCGACGGC
ACCTACTGGA TCGGCGACGA GTTCGGCCCG TTCCTGCTGC ACTTCTCGCC TACCGGCAGG
CTGCTTGAGG CCCCCGTCTC GCTGCCCGAC GTGAAGGCCC CGGAGAACCC GTTCCTCGAC
GGCGGCCAGC CCAACCTGGG CCGGAGCAAG GGATTCGAGG GCATGGCCCG CTCGGTCGAC
GGCCGCAGGC TGTATCCGCT GCTGGAGGGC ACCGTGACCG GCGACCCGTC CGGATCGCTG
CGGATGCACG AGTTCGACCT GCGCAGGCGG GCCTACACCG GCAAGCGCTG GACCTACCGG
CTGGACAGCT CGGACAACGC GATCGGCGAC ATGATCGCCG TCGACCGGAA CCGGTTCCTG
GTCATCGAGC GTGACAACCT CCAGGGGGAC GCGGCCAGGA CCAAGCGCAT CTACCTGGTG
GACACCCGCG ACCGGGACCT GCGCAAGACC CTCGTCGCCG ACCTGCTCGA CCTGGCCAAC
CCGCGCGGCC TGGGCGGGTT CGGGGAGACC TTCCGCTTCC CGTTCCAGAC CATCGAGGAC
ATCGTGATCC TCGACGACCG GACGCTGGGC GTGCTGGACG ACAACAACTT CCCGTTCTCC
GCCGGCCGTA CGCCGGACCG GCCCGACGAC AACGAGTTCA TCACCATACG GCTGTCGCGC
CCGCTCCTGG CGGACCCCCG CGTCTACCTG TGA
 
Protein sequence
MTITLGAAVL ALAMAAPAVA DPWRPGFDRA TLTGFASLPA QTFVPGSEPS GAQLGTAPVN 
GVTPPFAGQP VQGFSGIVRR HDGTFDALSD NGYGAKANSA DFLLRVHRIR PDFRRGKVEV
LGGFDLSDPD GHVTWPLTRT DRKLTGADFD VESIVRTLDG TYWIGDEFGP FLLHFSPTGR
LLEAPVSLPD VKAPENPFLD GGQPNLGRSK GFEGMARSVD GRRLYPLLEG TVTGDPSGSL
RMHEFDLRRR AYTGKRWTYR LDSSDNAIGD MIAVDRNRFL VIERDNLQGD AARTKRIYLV
DTRDRDLRKT LVADLLDLAN PRGLGGFGET FRFPFQTIED IVILDDRTLG VLDDNNFPFS
AGRTPDRPDD NEFITIRLSR PLLADPRVYL