Gene Sputcn32_3892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3892 
Symbol 
ID5081274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp4517310 
End bp4518077 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content42% 
IMG OID640501104 
Productglycosyl transferase family protein 
Protein accessionYP_001185397 
Protein GI146294973 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGAAGC ACTCGTTATC CGTTATGTTA ATCACCAAGA ATGAGGCCGA TCGCGTAGAG 
CGTTGCCTCG CGTCTATCGC AGATATTGCC GATGAAATTA TCGTGCTTGA TAGCGGTTCA
ACAGATAACA CTCTCGTGAT ATGTCAAAAA TATACTGACA AAATTACTGT TACCGACTGG
CCAGGATTTG GTAAACAAAA GCAAAGGGCT TTGGATCAAA CGAGCTGTGA CTGGGTATTG
TCAATTGATG CAGATGAAGC ACTCGATGAC ACGATGCGAA ATGCCTTAGT TGCGTTGTTA
TCACAGGAAC AGATCAAAGA ATCGGCTTTT TGCTTGCCAT GGGGAGTCAC TCTTTATGGT
AAAACATTGA AGTATGGGCG TAGTGCTAGG GCTGTTTTAC GGCTATTTAA GCGGGAGGGG
GCGCGCTATA CCCTTGATGA AGTTCATGAA ACAGTGATTC CAGCGGATGG CAATATTGGT
AAGTTAAAAG GATTATTATT ACATTATACC CACCGTGATT ATGGGCATGG TTTAAATAAA
GCCGCTCAAT ATGCTTGGCT TGGTTCCCAG AAATATCACC GAAAGGGTAA AAAATCCCAT
GGTCTCATGT TGGCGCTTTT AAGAGGATTA TGGACTTTTT TACATATTTA CTTTTTACGC
CGAGGCTTTT TAGATGGTCG AGTAGGCTTT ATCGTTGCAA TGACCTATGC ACAAGTCAAC
TTTAATAAAT ATGTTGGATT ATGGTTACTT GAAAATAAAC GGTGCTAG
 
Protein sequence
MKKHSLSVML ITKNEADRVE RCLASIADIA DEIIVLDSGS TDNTLVICQK YTDKITVTDW 
PGFGKQKQRA LDQTSCDWVL SIDADEALDD TMRNALVALL SQEQIKESAF CLPWGVTLYG
KTLKYGRSAR AVLRLFKREG ARYTLDEVHE TVIPADGNIG KLKGLLLHYT HRDYGHGLNK
AAQYAWLGSQ KYHRKGKKSH GLMLALLRGL WTFLHIYFLR RGFLDGRVGF IVAMTYAQVN
FNKYVGLWLL ENKRC