Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3892 |
Symbol | |
ID | 5081274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 4517310 |
End bp | 4518077 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640501104 |
Product | glycosyl transferase family protein |
Protein accession | YP_001185397 |
Protein GI | 146294973 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAAGAAGC ACTCGTTATC CGTTATGTTA ATCACCAAGA ATGAGGCCGA TCGCGTAGAG CGTTGCCTCG CGTCTATCGC AGATATTGCC GATGAAATTA TCGTGCTTGA TAGCGGTTCA ACAGATAACA CTCTCGTGAT ATGTCAAAAA TATACTGACA AAATTACTGT TACCGACTGG CCAGGATTTG GTAAACAAAA GCAAAGGGCT TTGGATCAAA CGAGCTGTGA CTGGGTATTG TCAATTGATG CAGATGAAGC ACTCGATGAC ACGATGCGAA ATGCCTTAGT TGCGTTGTTA TCACAGGAAC AGATCAAAGA ATCGGCTTTT TGCTTGCCAT GGGGAGTCAC TCTTTATGGT AAAACATTGA AGTATGGGCG TAGTGCTAGG GCTGTTTTAC GGCTATTTAA GCGGGAGGGG GCGCGCTATA CCCTTGATGA AGTTCATGAA ACAGTGATTC CAGCGGATGG CAATATTGGT AAGTTAAAAG GATTATTATT ACATTATACC CACCGTGATT ATGGGCATGG TTTAAATAAA GCCGCTCAAT ATGCTTGGCT TGGTTCCCAG AAATATCACC GAAAGGGTAA AAAATCCCAT GGTCTCATGT TGGCGCTTTT AAGAGGATTA TGGACTTTTT TACATATTTA CTTTTTACGC CGAGGCTTTT TAGATGGTCG AGTAGGCTTT ATCGTTGCAA TGACCTATGC ACAAGTCAAC TTTAATAAAT ATGTTGGATT ATGGTTACTT GAAAATAAAC GGTGCTAG
|
Protein sequence | MKKHSLSVML ITKNEADRVE RCLASIADIA DEIIVLDSGS TDNTLVICQK YTDKITVTDW PGFGKQKQRA LDQTSCDWVL SIDADEALDD TMRNALVALL SQEQIKESAF CLPWGVTLYG KTLKYGRSAR AVLRLFKREG ARYTLDEVHE TVIPADGNIG KLKGLLLHYT HRDYGHGLNK AAQYAWLGSQ KYHRKGKKSH GLMLALLRGL WTFLHIYFLR RGFLDGRVGF IVAMTYAQVN FNKYVGLWLL ENKRC
|
| |