Gene Sputcn32_3870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3870 
Symbol 
ID5081252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp4492500 
End bp4493123 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content46% 
IMG OID640501082 
Productparaquat-inducible protein A 
Protein accessionYP_001185375 
Protein GI146294951 
COG category[S] Function unknown 
COG ID[COG2995] Uncharacterized paraquat-inducible protein A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCGT TATTCTCTAT TTTCATTATT CTCTTATCCT TGGCATTGCT AGTCCCTGGG 
GTGACTCAAC CTATTTTGAG CATTAGCGGC AGTATCGATA AAGCTAAGCT TGCCGAGCAA 
GGCATAGAAC AAGTTACCCA AAGGTTTGAT GAAGATGCGG GGCGTGACCA TGCCCGCGGC 
ATGCTAAACA TGGTCAGTAG TTTACTTGGG CTCAACAGCC TTAAGGGTGA AGTCGAAGTG 
CTGCAGAAAA CCCGCAGTAT ATGGGGGACA GTGACCGAGC TTTACACCAC TGGCAATGGA 
TTGGTCGCAG CATTAGTCAT GTTGTTTAGT GTGGTCATTC CTGCGTTGAA GTTAAGTTTA 
ATGTTAGCAC AGCAATGTGT TAGCTCTATT GGGTTGAAAC TGCGGGTTAA TGCCCTTGTT 
AATGCGCTCG CCAAGTGGTC GATGGCTGAT GTGTTTGTGG TGGCGCTGAT CATTACGTTT 
ATGGCGGGAA ATGCTTCTGG CGGCATGGAG GAAATGTTAA AAACCCAGGC GCAATTTGAA 
AACGGTTTTT ACTTCTTTAC CGCTTACTGC ATTTTATCGA TCCTGAGTGG TTATTTAGTG 
CGTCGCCCAA CGCCAATTTT GTAG
 
Protein sequence
MKPLFSIFII LLSLALLVPG VTQPILSISG SIDKAKLAEQ GIEQVTQRFD EDAGRDHARG 
MLNMVSSLLG LNSLKGEVEV LQKTRSIWGT VTELYTTGNG LVAALVMLFS VVIPALKLSL 
MLAQQCVSSI GLKLRVNALV NALAKWSMAD VFVVALIITF MAGNASGGME EMLKTQAQFE 
NGFYFFTAYC ILSILSGYLV RRPTPIL