| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3789 |
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| Symbol | |
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| ID | 5081073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 4398082 |
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| End bp | 4398987 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640501002 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_001185295 |
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| Protein GI | 146294871 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAAC CACTCACAAT CACCAGCAGC CATTCCCATT TTAGCTTGGC ATGGCGCGCC
TATTTTGAAA TGACCAAACC CAAAGTCGTC GCCTTAATGT TGCTCACGGT ATTAGTCGGC
ATGTGTTTAG CGGTACCCAC TGCCGTCCCC GTACAGCCAT TAATCGCAGG TATGTTCGGT
ATTGCCTTAA TGGCAGGCTC GGCTGCCGCT TTAAATCATC TGATCGATCG ACGCATCGAT
GGCATGATGG CTCGCACCTA TAATCGCCCA TTGCCCAAGG GACGAGTTTC GGCCAAGCGA
GCCTTAATTT TTGCCGCCAG CATTGGAGGT TTAGGTTTTG TGGTTTTATA TGTTTTGGTT
AATCCGCTCA CTGCATGGCT CACCTTCGCG AGTCTCATCG GCTATGCGCT GGTTTACACA
GCTTATTTAA AGCGGGCAAC CTCGCAAAAT ATTGTTATTG GCGGTCTTGC GGGGGCGATG
CCGCCATTGC TGGGATGGAC GGCTGTTACC AACCAATTCC ATGGGCATGC ATTGCTGTTA
GTGATCATTA TTTTTACTTG GACTCCGCCT CATTTCTGGG CATTAGCCAT TCACAGACGA
GCCGAATATG CCAAAGTAGA TATCCCAATG CTTCCCGTTA CCCACGGGGT CGAATTTACT
AAAACCTGTA TCTTGCTCTA TACCGTATTA CTAGCAATCG CTTGTCTCTT GCCAGTGTTG
GTTGGTATGT GTGGGCCAAT GTATTTTGTG TGTTCTAGCT TGCTGAGCAG TGTATTTATT
TATAAGGCTT GGCAACTGAA ATATCGGGAT CGTGACGGCT TAGCAATGCA AGTATTTCGC
TTCTCTATTT ACCATTTAAT GTTGCTATTT ATGGCATTAC TAATCGACCA TTACCTGTGG
AGCTAA
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| Protein sequence | MAKPLTITSS HSHFSLAWRA YFEMTKPKVV ALMLLTVLVG MCLAVPTAVP VQPLIAGMFG
IALMAGSAAA LNHLIDRRID GMMARTYNRP LPKGRVSAKR ALIFAASIGG LGFVVLYVLV
NPLTAWLTFA SLIGYALVYT AYLKRATSQN IVIGGLAGAM PPLLGWTAVT NQFHGHALLL
VIIIFTWTPP HFWALAIHRR AEYAKVDIPM LPVTHGVEFT KTCILLYTVL LAIACLLPVL
VGMCGPMYFV CSSLLSSVFI YKAWQLKYRD RDGLAMQVFR FSIYHLMLLF MALLIDHYLW
S
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