| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3686 |
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| Symbol | |
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| ID | 5079019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 4297420 |
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| End bp | 4298139 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640500892 |
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| Product | ThiJ/PfpI domain-containing protein |
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| Protein accession | YP_001185193 |
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| Protein GI | 146294769 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAA ATATTGAAGC GGCTCAAAGT GATAAAACAA ATCATCCAAT CAAACACAAA
TTAAGAGTAG GTATTTTCCT TTACCCCGGC ATGACGATGC TCGATGCCTA TGGGCCACTA
CAGTTTTTAG CCTTTGTGCC ATCTTTTGAA ACCTTCACTT TTGCGAAAAC CAGCATGCTA
TTACCCTGTG ATGCGGGCGT TAACTTACAA CCTAATTACG ATTTTGACCA TTGCCCACCA
ATAGATATCC TGTTAGTGCC TGGGAGCGCA AATCCTTTGG CGCAAATACA GGATGAGCAA
GTTATTTCCT TCTTAAAACA TAAGGGGGTG CAAGCACAAT ACATTACATC TGTATGCACT
GGTGCCTTGA TTCTTGCGGC AACAGGTTTA CTTAATGGTT ATCGCACGAC CACTCACTGG
GCTTATGCTT CAGTGTTGGC ACAATATCCT CAAATTACCT TTGAAAATAA ACGTATTGTG
ATTGACCGTA ATAGGATCAG TGGCGGCGGT ATTACTGCTG GGCTGGATTT TGCATTGACT
CTTATTGCCA ATATAGAGGG GGAAGAACAG GCGAAAACTC TGCAGTTATT GTTTGAATAT
GACCCTAAAC CGCCCTTTAA TTGCGGTTCT CCCATATTGG CAGACGCTTC TCTGGTACAG
AGGGTTGAGC AGGAGGTTAG GCAGATAGCC TCAGGTTTAT TCGAGACCAC CACAGATTAA
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| Protein sequence | MSENIEAAQS DKTNHPIKHK LRVGIFLYPG MTMLDAYGPL QFLAFVPSFE TFTFAKTSML
LPCDAGVNLQ PNYDFDHCPP IDILLVPGSA NPLAQIQDEQ VISFLKHKGV QAQYITSVCT
GALILAATGL LNGYRTTTHW AYASVLAQYP QITFENKRIV IDRNRISGGG ITAGLDFALT
LIANIEGEEQ AKTLQLLFEY DPKPPFNCGS PILADASLVQ RVEQEVRQIA SGLFETTTD
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