Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3466 |
Symbol | |
ID | 5080501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 4033087 |
End bp | 4033749 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640500665 |
Product | flagellar hook capping protein |
Protein accession | YP_001184975 |
Protein GI | 146294551 |
COG category | [N] Cell motility |
COG ID | [COG1843] Flagellar hook capping protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGTGG CTAGCGCAAC AAATAACCCA GTCCAGAATC CTGCTGGCGC ATTGGCGGCA CCGGGGAATG ATGCAGCATC ATTAAAAAAT GAGTTTATGA CATTAATGAT TGCGCAGATT AAAAACCAAG ACCCGACTAA ACCGCTTAAC AGTGCTGAAT ATATCTCTCA GCTAGCGCAG TTTTCGCAGG TCGAAAGTTT AGAAGGGATG CGGAAGAATC AATCCAACCA AATGATCATG ATGGAAAATT TAGGCATTGT GCAATCGGCG TCTTTGATCG GCAAGAATGC CATGGTGCCT GTGTCTGAAT TTAAGCTCGA TGGTGAAACG GTTGAGGGAA AAGTGTATTT GGAGAATGCG GTTGAAGCAC TCGATATCGA GATTGTGAAT TCCGAAGGAC AAGTTGTCCA CACTATGCAA TTAGGTGCGC AAGCAGTCGG TGATATTCGT TTTGCTATCG ATCCAGATGA GCTGGGATTA GAAAAAGGCC AATATGAAAT CAAAGCGAAG GCGACACTGG GTGAAAATAG TTTAGTCGCG CCTACGTATA TAAAAGCACC GATAGAGCGA ATCCATTTTT CCAGTGCATC GGGCATGATG ATGGCTGAAA TGGGCCATGG TGTCGGTGTG ATTTCAGTTC TCAATATTTC TGAAGTTTCG TAA
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Protein sequence | MEVASATNNP VQNPAGALAA PGNDAASLKN EFMTLMIAQI KNQDPTKPLN SAEYISQLAQ FSQVESLEGM RKNQSNQMIM MENLGIVQSA SLIGKNAMVP VSEFKLDGET VEGKVYLENA VEALDIEIVN SEGQVVHTMQ LGAQAVGDIR FAIDPDELGL EKGQYEIKAK ATLGENSLVA PTYIKAPIER IHFSSASGMM MAEMGHGVGV ISVLNISEVS
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