| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3432 |
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| Symbol | |
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| ID | 5079823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 4002426 |
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| End bp | 4003745 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640500631 |
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| Product | ATP-dependent RNA helicase RhlB |
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| Protein accession | YP_001184941 |
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| Protein GI | 146294517 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAA CACATTTATC TACCCAAAAA TTTGCCGACC TTCCTCTACA TCCAGAGGTA
AAACAGGCTC TTGCAGAGAA CGGTTTTGAA TTTTGTACGC CGATCCAGGC GTTATCATTA
CCCGTATTAC TTCAATCAAA AGATATCGCT GGTCAGGCTC AAACGGGCAC TGGCAAGACG
ATGGCTTTTT TGGTTGCTAC ATTTAATCAT TTATTATCGA CGCCAATACC AGAAGGCCGT
CAGATAAATC AACCCCGTGC CATTATCATG GCACCCACCC GTGAATTGGC TATTCAAATT
GCTAAAGATG CGATTTTATT GGCTAAACAT ACTCGCTTAA AAGTGGGAAT TGTTTACGGT
GGTGAAAGTT ATGATGTTCA GCGTAAAGTA TTAGATCAAG GTGTTGATAT CTTGATTGGT
ACTACTGGGC GCATCATCGA TTATGTGCGT CAGGGCATTA TCAGCTTAAC GGCTATTCAA
GCTGTCGTAT TAGATGAAGC GGATCGCATG TTCGATTTGG GCTTTATCAA GGATATCCGT
TTCCTATTTA GGCGTATGCC TGATGCCAAT CAACGGCTCA ATATGCTGTT CTCGGCAACC
CTCTCGATGA AGGTGCAAGA ACTGGCCTAT GATCATATGA ATGATCCGGT CAAAGTGGAT
ATTGCGCCCG ACGAAAAAAC CTCTAAGAAC ATTAAAGAAG AAGTTTTTTA TCCTTCCCAA
GAAGATAAAA TGCGCTTGTT GCTGACCTTA ATTGAAGAAG ATTGGCCTGA AAAAGCCATT
GTATTTTCAA ACACTAAGCA TAGCTGCGAA AATTTATGGT CTTGGCTCGA AGGAGATGGT
CATCGCGTTG GATTGTTAAC AGGTGATGTT CCTCAGAAAA AGCGTATTCG CATTCTGGAG
CAATTTACTA GTGGCCAATT GGATATCCTA GTCGCGACAG ACGTTGCTGC GCGTGGCTTA
CATATTTCTG ATGTATCCCA TGTTTACAAC TATGACTTAC CTGACGATTG TGAAGACTAT
GTACACCGAA TTGGTCGAAC AGGACGCGCG GGTAATAAAG GGGTTTCCAT CAGCTTTGCC
TGTGAAGAAT ATGCGCTGAA CTTGCCGGCA ATCGAAAGTT ATATCAATCA CTCCATCCCT
GTGAGTAATT ATGATAGTTC GGCATTGTTA GAGGATATTC CTGCGCCAGT TAAGATCCCG
CGTAAACATC CTGCGGGTAC GCGTAACCTA CGCGAGCGTG CAGGAGCTGG TCGCCCGCAA
GGCGCCCATC GTAGTGGTGG ACGTCCACCT CGCCATGACA GGACACGTAG ACACTCGTAA
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| Protein sequence | MSETHLSTQK FADLPLHPEV KQALAENGFE FCTPIQALSL PVLLQSKDIA GQAQTGTGKT
MAFLVATFNH LLSTPIPEGR QINQPRAIIM APTRELAIQI AKDAILLAKH TRLKVGIVYG
GESYDVQRKV LDQGVDILIG TTGRIIDYVR QGIISLTAIQ AVVLDEADRM FDLGFIKDIR
FLFRRMPDAN QRLNMLFSAT LSMKVQELAY DHMNDPVKVD IAPDEKTSKN IKEEVFYPSQ
EDKMRLLLTL IEEDWPEKAI VFSNTKHSCE NLWSWLEGDG HRVGLLTGDV PQKKRIRILE
QFTSGQLDIL VATDVAARGL HISDVSHVYN YDLPDDCEDY VHRIGRTGRA GNKGVSISFA
CEEYALNLPA IESYINHSIP VSNYDSSALL EDIPAPVKIP RKHPAGTRNL RERAGAGRPQ
GAHRSGGRPP RHDRTRRHS
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