Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2880 |
Symbol | |
ID | 5078627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3340459 |
End bp | 3341715 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640500083 |
Product | hypothetical protein |
Protein accession | YP_001184398 |
Protein GI | 146293974 |
COG category | [S] Function unknown |
COG ID | [COG3503] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTCTA ATATCAGTGC TAATCCAGCG TTATCTTCAG GTTTTACCGA GCAAGAACGG GGTCATTCTA TTGGCCGCAC CCGGATCAAT AGTATCGATA TGATGCGCGG TATGGTGATG CTTATCATGT TACTCGACCA TGTGAGGGAG CGGTTTTTCT TTCACATGCA GGTGAGCGAT CCTATGGATT TGAGTTCGAC CTCTTGGTGG CTTTTTCTGA GTCGTTTTGC TGCCCATTTT TGTGCGCCGG TCTTTGTGTT CTTAACTGGG GTTTCTGCAT GGCTTTATGC CAATCGTAGC CATGGTGAGC CACGTTCAGC ACGGGAGTTT TTGATTAAAC GCGGGCTGTT TTTAATCGCG CTGGAAATTT TAGTGATTAA CTTCTCTAAC CTCTCTTGGA TGGTCAGCTA TTACACCCTT TGGTTACAGG TGATTTGGGT GATTGGTCTG AGTATGTTAG CGCTCGCTGC ACTGATAAAC CTGCCTAGAC CTTGGATGGC CCTTTTAGGA TTTGCGATTG TTTTTGGTCA TAATCTGTTG ACGCCTATTG GTTTTCAGCC CAATGAGTGG GCTTACGGTC TGTGGACCAT ATTGCACGAC CGCGGTTATC TCGTCAGCGA AGGTGCGCTT AGGGTTAAGG TGAGTTATCC CGTGCTGCCT TGGATTGGAG TGATTTTACT GGGTTATGTT GCAGGGCCAC TTTTTAGTAA TAAGCCGAAC GGAAGCCATC TTGATGCATT GGCTCGCCAG CAAAAGCTGT TGTTTTTAGG GATCAGCTGT TGGGTACTTT TTGCGGTGCT ACGTGGGTTT AACCTTTATG GCGAAACCTT GCCTTGGCAG TCGGGGGCAC ATTTGGGTGA AACCTTGATG TCGGTATTTA ACTTAACGAA ATACCCGCCA TCATTAAGCT TTTTACTGGT GACTTTAGGC GGCATGTTCT TTTGCTTAGT GGCCTTTGAG CGGTATTTTG CATCAAGTGG GAAAGTGGGT GGGAGATTAG CGCGAGTCGG TAATGGGTTG TCTGTGTTTG GCTCAGTCCC TATGTTCTTC TATATCTTGC ATTTGTACGT GCTGTTACTG CTTTATACTT TAGCGAAATT CATCTTTGGC GCAAACTATG GTGAGTACTT TGGCGTGAAC AACATGGGAT GGGTTTGGTT TATCGCGGGC GTATTAGCCA TCGCATTGTA TTATCCCGTT AAGCGATTTA GCGAGTATAA AAAACACAGC ACTCAAGCTT GGATTAAGTA CCTCTAA
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Protein sequence | MNSNISANPA LSSGFTEQER GHSIGRTRIN SIDMMRGMVM LIMLLDHVRE RFFFHMQVSD PMDLSSTSWW LFLSRFAAHF CAPVFVFLTG VSAWLYANRS HGEPRSAREF LIKRGLFLIA LEILVINFSN LSWMVSYYTL WLQVIWVIGL SMLALAALIN LPRPWMALLG FAIVFGHNLL TPIGFQPNEW AYGLWTILHD RGYLVSEGAL RVKVSYPVLP WIGVILLGYV AGPLFSNKPN GSHLDALARQ QKLLFLGISC WVLFAVLRGF NLYGETLPWQ SGAHLGETLM SVFNLTKYPP SLSFLLVTLG GMFFCLVAFE RYFASSGKVG GRLARVGNGL SVFGSVPMFF YILHLYVLLL LYTLAKFIFG ANYGEYFGVN NMGWVWFIAG VLAIALYYPV KRFSEYKKHS TQAWIKYL
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