Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2513 |
Symbol | |
ID | 5080857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2924485 |
End bp | 2927574 |
Gene Length | 3090 bp |
Protein Length | 1029 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640499696 |
Product | amidohydrolase |
Protein accession | YP_001184033 |
Protein GI | 146293609 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.1394 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGATAA ACAATAAGTT AATACTAAGC TCCTGCATGA TAAGCAGCTT AGTATCCCAA ACAATATTCG CTGCGCCCAA CCCTGTAACG CCTGTAAATA AGTTAACAGC ATTGACCCAC GCAGAATTAA TTATTTCCCC TGATAAACGG CTCAGCAATG CAACGCTATT AATTGAAAAC AATAGAATTA AAGCGGTAAT TGAGCAGGGA GAGATCCCCG CAGCAGCTTT ACAAATTGAT CTAACGGGTT ACACCATTTA TCCCGGATTT ATCGATCCCT TTACCGACTA TGGTATTGAA TTTGAATATC CAAAACTGGG ACTGACACGC CCTGTTTATG ATATTAAACG TATCGGTGGT AATGCCGAAA ATGGCGCCAT TCATTCTGAA AAAGAATGGG TTAATTATGT TTATCCAAAT AAAGAACGCG CTAAAGACTG GATTAATAAT GGTTTTACTA GCGTACAAAC AAGCAAACTT GATGGTATTT TTCGCGGTAC AGGTGTCAGT CTTTCTTTAG CGGACAAAAC GGCTAACGAA GTGATTTACC GCGCCCGCAG CCAACCTTTT ATGGCATTTG ATAAAGGCAG TTCAGAACAA GATTATCCCA GTTCATTAAT GGGCAGTATT GCGCTCATTA GGCAAACGTT TGCCGATGCC AACTGGTATA ACCAAAATAA AAACAAATCA GCAAATGGCA CAACAAATAG TCAAATCGAA TTTAATATTG CCTTTGAACG GCTCGATAAG TTAGCTGAGA AACCCATCGT ATTTGAAACC AAAAATCTTA ATGATTTATT ACGTGCCGCT AATTTACTTA AAGAGCATAA CCTCTCTGGT TACTTACTGG GAAATGGCCA GGAATATGCA CGGATCAATG AATTGAAGGC GTTAAATTAT CCTCTGATTC TCCCCTTAAA CTATCCTCAA GCCCCAGAAG TGACAACAGA TGATGCAGAA CGCGAAGTAT CCCTTGCAGA ATTAAGGCAC TGGGAACGGG CATCAACAAA CCCCAATGTT GTTGCTAAAG CTGAATTGCC CTTCGCATTC ACCCAATATG GGATTAAAAG CGATGCATTC TGGCCCCGCC TACGTCAAGC CATCGCCCAA GGATTAACCG AAGAAAAAGC CCTCGCAGCA CTTACAACTC AAGCTGCCGA AATGATAGGC ACTGCCGAGT TAACGGGTAA ACTCGCTCCC GGTTATATGG CTGACTTTGT TGTGACAAAA GGTAATATTT TTAAGGATGG TCAGATCTAC AGTGTTTGGT TGCAAGGTCA GGAGCAAAGT CTGCGCTCAC TTCCCCAAGC ACGATTACTG GGGGATTACC AATTAAGCCT CAATAACCTC ACGCTAGATT TATCGCTACA TGATGAAAGT AAAAATGATA AACCCAACAT CCAAGGCAGC TTAAGCAGTG GCGAACAAAG TATCTCACTC ACTCAACTTA AGTTAGATGA TAACGGGAGA TTGAGCTTTA CTGCCGATTT GAGCGCCGCA GGCATTAACG GCCTTAGCCG CTTTACGCTG TGGATGGCCG ATGACGGCAT TCAAGGTCGT ATGGTCGATG CAAAAAGTCG CACTACAAAT GTTGCCGGTA TCGCTATGAC TCAAACTGCA AAGCTCAAAA GTACAGACCA AGCAAGCAAT CGAGCTCCCA AGAATGAAGC CAACACGAGC CTAGTGAGTC ACCTCACCTT CCCTAACGTC GCTTACGGAC TGAGCGAAGC ACCTAAGGTG GAGAAACTAC ATATCAAGAA TGCCACCCTG TGGACATCGG ATAAGCAAGG CATTCTCGAA CATGCTGATC TCTTGATGGC CAATGGTCGT ATCGAAAAAG TGGGCCAACA GCTAAGCACA CCTTCAGGCT ATCAAGTGCT CGATGCTACG GGTAAACACC TTACGGCAGG TATTATCGAT GAGCATTCCC ATATCGCTAT TAATGGCGGC ACTAACGAAG GCACCGATGC CGTGACTTCA GAAGTGCGCA TTGGCGATAT CATTAATCCC GAAGATATCT CAATCTACCG CGCTTTAGCG GGCGGCGTCA CCAGTGCACA ACTCCTCCAT GGCAGTGCTA ACCCTATTGG CGGCCAATCG CAACTGATCA AAATGAAATG GGGCGAGCCA GCCGAACAAC TTAAGTTCGC TAATGCGCCA GCCAGTATCA AGTTTGCTTT AGGTGAAAAT GTTAAACAAA GCAACTGGGG AGAAAAGTTT GTGCAGCGTT TTCCGCAAAC GCGTATGGGC GTTAAAGCAT TATTCGAAGA AACCTTCGAT GCCGCTCTTA CCTATGAGAA AGCCTTTAAA GCCTATAACG AGCTGCGTTC AAGCGATAAG AAAAACACCA TTGCCCCACG TCCGAGTTAC CGTCTTCAAG CGGTAGCCGA GGTATTAAAA CAGCAACGCG ATGTGCATAT TCACTCCTAT GTACAATCTG AAATTCTGAT GTTTTTACGT TTAGCCGAGG CTTATCGCTT TAAGGTACAA ACCTTTACCC ATGTGCTCGA AGGTTACAAA GTGGCGAGTG AGCTAGCGGC TCACGGTGCT GGCGCATCCA CCTTTGCCGA TTGGTGGGCG TATAAATTCG AAGTGTATGA TGCCATTCCC CAAAATGCTT GTCTGATGTT AAACAAGGGC GTGACCACCA GCATTAACTC CGATGATTAT GAAATGCAGC GCAGGCTTAA CCAAGAAGCC GCCAAATCAA TGATGTATTG TGATATGTCA AAAGAGGATG CTTGGAACAT GGTCACCATC AATCCGGCTA AGCAATTGAG AGTCGATGAA TTTGTAGGCT CACTTACCCC AGGGAAAATG GCTGATGTCG TCCTGTGGAA CGCTGAACCT CTATCCATTT ACGCGAAAGT AACCCATGCA TGGGTGGAGG GTAAGCGCTA TTTTGACCGC GACCAAGATC AACTTGCCCA GCAAACTGTG GTGAAAGAGC GCGCCGCACT TATCCAAAAA ATTCTCAACA GTGATGATAC AGCGAAAGCA GGTGAAAAAA TCACACCGTT AAACGAGCCA CAATGGCACT GCGATACCCA CTATCAGGCA TGGGGCCACA ATCATCAGGG AGCACACTAA
|
Protein sequence | MQINNKLILS SCMISSLVSQ TIFAAPNPVT PVNKLTALTH AELIISPDKR LSNATLLIEN NRIKAVIEQG EIPAAALQID LTGYTIYPGF IDPFTDYGIE FEYPKLGLTR PVYDIKRIGG NAENGAIHSE KEWVNYVYPN KERAKDWINN GFTSVQTSKL DGIFRGTGVS LSLADKTANE VIYRARSQPF MAFDKGSSEQ DYPSSLMGSI ALIRQTFADA NWYNQNKNKS ANGTTNSQIE FNIAFERLDK LAEKPIVFET KNLNDLLRAA NLLKEHNLSG YLLGNGQEYA RINELKALNY PLILPLNYPQ APEVTTDDAE REVSLAELRH WERASTNPNV VAKAELPFAF TQYGIKSDAF WPRLRQAIAQ GLTEEKALAA LTTQAAEMIG TAELTGKLAP GYMADFVVTK GNIFKDGQIY SVWLQGQEQS LRSLPQARLL GDYQLSLNNL TLDLSLHDES KNDKPNIQGS LSSGEQSISL TQLKLDDNGR LSFTADLSAA GINGLSRFTL WMADDGIQGR MVDAKSRTTN VAGIAMTQTA KLKSTDQASN RAPKNEANTS LVSHLTFPNV AYGLSEAPKV EKLHIKNATL WTSDKQGILE HADLLMANGR IEKVGQQLST PSGYQVLDAT GKHLTAGIID EHSHIAINGG TNEGTDAVTS EVRIGDIINP EDISIYRALA GGVTSAQLLH GSANPIGGQS QLIKMKWGEP AEQLKFANAP ASIKFALGEN VKQSNWGEKF VQRFPQTRMG VKALFEETFD AALTYEKAFK AYNELRSSDK KNTIAPRPSY RLQAVAEVLK QQRDVHIHSY VQSEILMFLR LAEAYRFKVQ TFTHVLEGYK VASELAAHGA GASTFADWWA YKFEVYDAIP QNACLMLNKG VTTSINSDDY EMQRRLNQEA AKSMMYCDMS KEDAWNMVTI NPAKQLRVDE FVGSLTPGKM ADVVLWNAEP LSIYAKVTHA WVEGKRYFDR DQDQLAQQTV VKERAALIQK ILNSDDTAKA GEKITPLNEP QWHCDTHYQA WGHNHQGAH
|
| |