| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2135 |
|---|
| Symbol | |
|---|
| ID | 5080011 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 2451844 |
|---|
| End bp | 2453718 |
|---|
| Gene Length | 1875 bp |
|---|
| Protein Length | 624 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640499297 |
|---|
| Product | alkaline phosphatase |
|---|
| Protein accession | YP_001183655 |
|---|
| Protein GI | 146293231 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAA GAACATTCCC TCTTACAGCG GCTGTTATGG GTAGCTTATT GCTTTGTGCT
TGCAGTGGTG ATGACGGTGC TACGGGTGAT AAAGGCGACA ATGGACTGAG TTCACTTGTT
AACGTGACTG CATTGAATGT TGGGGATGCT AATTGTCCCG CGGGAGGTCA GCGTATTGAG
ACCGGATTAG ATGTTAATCG CAATGGGGTA TTAGATGAAA GTGAAGTAGA CCCCACACAA
ATACAGTTTG TGTGTCAGCC TCAAGTAGTA GGATTAACTG CAGAGTTGAT TGGTCGGCAT
CAGACGGGCA TTTATGGATT AAGTGCCGCC GAGATTGTTG AATACCATAG TGCTTCAAAT
CGTATTTTTG TCGTTAATGC GATCAGCGGT AAAGTCGATA TTATTGATGG TAGTTTATTA
GCAACCTCAT CAGCAGCCAC TGAACCCTTG GCATTGAATA ATCTCGATAA ACTAGCAGAA
CTCGATGTTG CTAAAGATGT GGGGCAAACC TTTATGGGGA GCGTCAATAG CGTTAGCATT
TCGGGTAACT TGCTTGCTGC GGCAATTGAA CGTGGGGATG CGGCGGGTAA TAAAACGCAA
GCTAATGGTT TTGTAGCCTT TTATCAGCTT AACGGTGCAG ATACTCCACA GTTTATCAGT
GCCGTTGAAG TTGGTGCCTT GCCGGATAAT GTGGTATTTA CCCATGATGG CAAAATGGTA
GTAGTCGCCA ATGAAGGCGA ACCCAATTCA TCCTATACCT TAGATCCTGA AGGCAGCATT
GCGCTTATTG CTATTACAGA GGGTAAACCT GCAGCAACGG CTACCATCAT AGGCTTTAGT
GATTTTAATC AAGGTGGTAC ACGTCATAGT GAGATCACTG CGGACATCAA AATTAATGGC
CCAATGGCCA GTGTGGCACA GGATTTAGAA CCTGAATATA TCGCGGTAAG CCAAGATAAC
CGTCGTGCAT TTGTCAGCTT ACAAGAGAAC AATGCCATTG CTGTCATTGA TATCGTCAAT
GCCAAAGTTG CAAAAATTTT ACCCTTAGGT CTGAAGGATT ATGGGCTTGA AGTGAATAAA
ATTGATGCGA GTGATAAAGA TGACCGAGTG AACTTGCAAA GCTACACCGG CGTTTACGGC
ATGTATCAAC CCGACACTCT TGCGACGTAC CGCTGGAATA ACACAGACTT TATTGTCACA
GCTAATGAAG GTGACTCCCG TGACTACAGT GCTTTTTCGG AAGAAGCCCG AGCAGGGGAT
TTAATACTCG ATGCCAATCA TCCCCAATTT GCAGCCGCTA AGGATAAAAC CCAATTAGCA
CGTCTTAAGG TAACGACAAG CATGGGGGAT GATGATAAAG ATGGCGATTA CGATAGGATT
GTTAGTTTTG GTGCTCGTTC ATTCTCGATT TGGACTGCCG ATGGTCAACA AGTGTTTGAC
AGTGGCAGTG ATTTTGAACG TATTACCGCA GCACTATTAG GTAATAAATT CAATAATAAC
AACGAAGAAA ATAAAGGTGA TAGCCGCAGT GATGATAAAG GCCCGGAGCC AGAAGCCTTG
GCCTTAGGTC AAATTGGCCA GCGTCTTTAT GCCTTTATTG GTTTGGAGCG AACTTCGGGT
TTTATGATTT ATGACGTGAC GAATCCTTTC GATGTGCATT TTATTGATTA TGTCGTCAAT
CGTGATTTTG ACGCTGACTT TACGATTAAT ACTGAAACTG GAGTGGTTAA AGGTGATGCG
ACTCTAGCGG GGGATTTAGG CCCAGAAGGG ATGAAGTTTG TGAGTGCTGA TAAGAGTCCT
AACAGCAAAC CTTTGCTGAT TATTGGCAAC GAGGTTAGCG GCAGCACCAG TGTTTATCAG
TTGAATGTAA AATAA
|
|---|
| Protein sequence | MKIRTFPLTA AVMGSLLLCA CSGDDGATGD KGDNGLSSLV NVTALNVGDA NCPAGGQRIE
TGLDVNRNGV LDESEVDPTQ IQFVCQPQVV GLTAELIGRH QTGIYGLSAA EIVEYHSASN
RIFVVNAISG KVDIIDGSLL ATSSAATEPL ALNNLDKLAE LDVAKDVGQT FMGSVNSVSI
SGNLLAAAIE RGDAAGNKTQ ANGFVAFYQL NGADTPQFIS AVEVGALPDN VVFTHDGKMV
VVANEGEPNS SYTLDPEGSI ALIAITEGKP AATATIIGFS DFNQGGTRHS EITADIKING
PMASVAQDLE PEYIAVSQDN RRAFVSLQEN NAIAVIDIVN AKVAKILPLG LKDYGLEVNK
IDASDKDDRV NLQSYTGVYG MYQPDTLATY RWNNTDFIVT ANEGDSRDYS AFSEEARAGD
LILDANHPQF AAAKDKTQLA RLKVTTSMGD DDKDGDYDRI VSFGARSFSI WTADGQQVFD
SGSDFERITA ALLGNKFNNN NEENKGDSRS DDKGPEPEAL ALGQIGQRLY AFIGLERTSG
FMIYDVTNPF DVHFIDYVVN RDFDADFTIN TETGVVKGDA TLAGDLGPEG MKFVSADKSP
NSKPLLIIGN EVSGSTSVYQ LNVK
|
|---|
| |