Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1914 |
Symbol | |
ID | 5078534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 2191804 |
End bp | 2192700 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640499075 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001183436 |
Protein GI | 146293012 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGGTTG CCTTGCAGTA CAGGACCGAT TTATTAGAAA TACATCGTTT TACGCGTTTC GAGAGCTCGC TAGCGCACTT AGGTTTTAGG CATTTTCAGC CCTTAGCGTC ACTTCGCCCA TGGGTACACC GTTACTTTCA TCTGCAGGTG GCAACAAATT TACCGCAGAG TATCGAACAA ACTTTCTATC CTGACGGCGG TACCAGCCTA CAGTTCTATT TCCCAGCACC AAGCCTTAAT ACAAACTCCG ATGAACCTAA AGTAGTTTTT CACTGTGGTC AGAGTCTACA TTCCCACGCA TTTGTCCCCG GAATAGAACA AATGATCGTC CGTTTTCATC CCGGCGGTGC TTTTCATTTA CTCGGAATTG CAGTGCAAGA GATTCAGCAA ACAAGTTCAC ATACTGTAAT CGAAGCCACT CAATTGCACC TACCAGGATT AAATCAGTTA TTATCACAAC TCGCAGACAC CAATCAGCCA ATGCAACGTA TCGCCCAACT CGAACAGTGG TTATTACAGT TAATCAAGCC ACAACTTGAT AGGGGAACAT GGTCTACCGC AGGGATTGTG CAAATGAGTT TACCAAGGCT TATCCAACCT CAAACCCGTT TAGAGAATTT TTATGGACAA CTTGCCCTAA GCCGCCGCCA ATTTGAACGC AGATTTAAAC AAGAAACGGG ACTCTCTCCG GCACAACTAC AGCAGTTAAA CAGAGTCAAA ATCGCCCGCG ATCTACTTAG TCAATCACCC GAACTTAATC TAGCGCAGGT GGCATTTGAT TGTGGGTTTT ACGATCAAGC TCATCTACAT CAACACTTTG TCAGGGTGAC ACAGCAAACA CCAGGGCAAT ACAAAAAACG CAAAATGTCG CAAATCTCCA ATCTAACGCA ACGCTAA
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Protein sequence | MVVALQYRTD LLEIHRFTRF ESSLAHLGFR HFQPLASLRP WVHRYFHLQV ATNLPQSIEQ TFYPDGGTSL QFYFPAPSLN TNSDEPKVVF HCGQSLHSHA FVPGIEQMIV RFHPGGAFHL LGIAVQEIQQ TSSHTVIEAT QLHLPGLNQL LSQLADTNQP MQRIAQLEQW LLQLIKPQLD RGTWSTAGIV QMSLPRLIQP QTRLENFYGQ LALSRRQFER RFKQETGLSP AQLQQLNRVK IARDLLSQSP ELNLAQVAFD CGFYDQAHLH QHFVRVTQQT PGQYKKRKMS QISNLTQR
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