| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1674 |
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| Symbol | |
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| ID | 5079332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1906927 |
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| End bp | 1909782 |
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| Gene Length | 2856 bp |
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| Protein Length | 951 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640498823 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001183198 |
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| Protein GI | 146292774 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.215373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTCTT TATCCTTAAC AGCAAAAGCG GTTCGCTACG GTATATTTGC TGCGGCCAGC
CTAACAACTT CAACATTCGT TTATTCAGAA GAGCAAACGG AAATATTTGA GCGTATTGAA
GTAACGGGTT CAAAAATTAA ACGTATTGGA GAACTTGCAC CAACACCAGT GACAGTTATC
TCTGGTGATG GATTAATTGA TGCTGGTGTT GTGAACGTTG CAGATTTACT ACACAAAATG
CCTAATACAT TAGTTGGATT ATCACCAGAA ACAACAAATA ATACTGTATT TGCAAGCGGA
TTAAATAACA CAGATTTAAG AGGTCTTGGC TCTGATCGTA CACTCGTACT TGTAAACGGT
CGTCGATTTG TTGCTGGAGC CCCTGGTTCT GGGGCTGTTG ATCTTAACAA CATACCAACT
GCCATGGTTG AGCGTATTGA AATCACAACT GGTGGTGCTT CTGCAGTATA TGGCTCTGAT
GCCATCGCAG GTGTTGTGAA CATCATTACA AAGAAAAGCT TTGATGGCAT TTCGGTTGAT
GTTTCAACAA CACAACCAAC CGAGGATGGT GGTGAAGAAA AATATGCCTC AATAACATTT
GGTTCTGAAA TAGGTAAAGC TAACTTTGTG ACTAACCTAA GTTGGGCTCG TCAGGAACAA
TTATCCTTTA TGGATAGAAA ATTTCTACGC GATGCACCTA TCGTTGTACG TAATCCCAAT
GCAACAGGTC CTGATGATCC TCAATCAATA GTGTGGGGAC ATGGTCAACA AGTATTAGCT
TCCTACAGTA AGACTGGAAC ATTTGTTTCG AATGGTACCC GTTATTCATT TGATGAAAAC
GGCAATGTAA GACCGATGGA GTTAGGCCAA CCTCTACCGC CATTAACGTC TGGTCGTGTC
GATTATCTTG GTGGAGAAGG TTATAACTTC GCAGAAAACT CTTTTATCAA AACGCCATTA
GATCGTATTA ACTTTTTCTC TGTAATGAAC TACGACATTA ATGATGATCA TAAAATGACA
ATGGAGGCGA CGCTTAGTAA AACAGATGCC TATGGCGAAA GCTCTCCAGC TTTCCTAAGT
TTTAAAGTGC ATGATGATAA TGGGTTTCTC TCCCCTGAAG CTGCAGCACT TATCGCTGCT
GAAGAAGCTA GGCTTGTTAA TGCAGGCAAA GCAGAACCAG GAGATGGTAT TTCTCTAGGA
TACCTTGCAT CGGACTTTGG TAATCGAAAA TATAGTCAAG AACGAACGAC AGCCCGTATA
GCACTTGGCT TTGAGGGAGC ACTTTCTGAA AATTGGTCTT ATGACACCTA TGCCACTGTT
GGACATGTTC AAGCTGATAC AGAATGGTAC GGTGAAATGT TCGAGCAACG CTTCTATGAC
GCTGTTGATA CAATAAAAAA TGATAAAGGG GAAGTAGTCT GTCGTAGTGA AAGTGCTCGA
AATAATGGAT GCCTTCCACT CAATATATTT GGACGCGGAA TCTACGATAA AAACGCCTAT
GATTGGGTAA GTACTGACGC AATTCGACGC TCATCTATCA CTCAATCAGC TCTCGGGGCA
TCCGTAAGTG GTGATCTATT TGAATTGCCA GCAGGTTTTG TATCGAGTGC ATTCTCTCTC
GAGTATAGAA AAGAGCAGGC AGACACTTTA CCAGATCCAG CTATGCGAGA GGGCTTACTG
TTCAACAACC AATCTCAGCC ACTTAAAGGT GAGTTTGATG TAACGGAAGC TTCTGCAGAA
TTGTCAATTC CATTACTAAG TGACATTACA TTAGTACAAG ATTTAACACT GGAAACAGCT
TTCCGTTATA TGGATTACTC GACATCTGGT TCTGATACTG CTTGGAAAGT AGGCTTAAAC
TGGGCTGTCT TCGACGATTT GAGGATCAGA TTAAACCGTT CGAAATCTGT TAGAGCTCCC
AATATAGGTG ACTTGTATAG CCCACCAGGA CAAACATTCA GATCTATAAA GGATTATTGC
GCTTCTAGCT ACCGCAACCA AATAAATCCT GAATATCTAG ACAATGTCTT GGCAAACTGT
GCGGCACAAG GCATTCCTAC CGATTTCGAA CCATCTCAAG AGTGGTATGG TTCGACTCGT
CCAGGATTTA TAGTCGGCAA TGAGGACTTA AAAAACGAAG TTGCTAATGA TATCACTATC
GGTTTTGTCT ATACCCCTAA CTTTATCGAG AACCTGAGTT TTACTGTTGA TTACTGGAAA
TTTGATATGG AAAATGTCAT CAACAGTTTT ACGGGCCCTG ATGTTGTAAA GTACTGCTAC
CAATCCAGCA CCCTAGACAA TCCATTCTGT CCATTGCTTG AGCGAGATCC AGATACACAT
GAGCTCACCA ATTACTATGA AAAGCCAGTT AACTCTGCGA CCAGTATTAC CTCTGGTGTC
GATATTGAAG CTAACTATAA GTTTGAAAGT AGCTTTGGTG ATTGGGGCTT CCGTCTATTC
AGCACCTATC TAGAAGAACG TTCCTTTAAT TCGACAGGTT TTGCAGAAGA TGAAATTAAA
GAAACTGGTG AGCAAGAGCG GCCACGTTGG CGTCATCGCT TTACAACGGA TTACACCTAC
GGAGATTTCT CTGCAGTCCT AACTGCAAAC TATCGCAGTA GCACCGTTTT AAGTAATGAC
TGGTCACCCA ATCAAAATAA CTATAATGAT ATCCCATCAT ATATTACGTT TGATTTAACC
AGTCGCTACA ACATCACTGA TGCATTACAG GTTCGTGCTG GCATACTCAA TATGTTTGAC
GAAACACCAC CACGTCAGCC AGGTGTATAT AACCAAGGTG CTTACTATGA CATTCTCGGA
CAACGTATCA CGATAGGGGT TAACTATACG TTTTAA
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| Protein sequence | MNSLSLTAKA VRYGIFAAAS LTTSTFVYSE EQTEIFERIE VTGSKIKRIG ELAPTPVTVI
SGDGLIDAGV VNVADLLHKM PNTLVGLSPE TTNNTVFASG LNNTDLRGLG SDRTLVLVNG
RRFVAGAPGS GAVDLNNIPT AMVERIEITT GGASAVYGSD AIAGVVNIIT KKSFDGISVD
VSTTQPTEDG GEEKYASITF GSEIGKANFV TNLSWARQEQ LSFMDRKFLR DAPIVVRNPN
ATGPDDPQSI VWGHGQQVLA SYSKTGTFVS NGTRYSFDEN GNVRPMELGQ PLPPLTSGRV
DYLGGEGYNF AENSFIKTPL DRINFFSVMN YDINDDHKMT MEATLSKTDA YGESSPAFLS
FKVHDDNGFL SPEAAALIAA EEARLVNAGK AEPGDGISLG YLASDFGNRK YSQERTTARI
ALGFEGALSE NWSYDTYATV GHVQADTEWY GEMFEQRFYD AVDTIKNDKG EVVCRSESAR
NNGCLPLNIF GRGIYDKNAY DWVSTDAIRR SSITQSALGA SVSGDLFELP AGFVSSAFSL
EYRKEQADTL PDPAMREGLL FNNQSQPLKG EFDVTEASAE LSIPLLSDIT LVQDLTLETA
FRYMDYSTSG SDTAWKVGLN WAVFDDLRIR LNRSKSVRAP NIGDLYSPPG QTFRSIKDYC
ASSYRNQINP EYLDNVLANC AAQGIPTDFE PSQEWYGSTR PGFIVGNEDL KNEVANDITI
GFVYTPNFIE NLSFTVDYWK FDMENVINSF TGPDVVKYCY QSSTLDNPFC PLLERDPDTH
ELTNYYEKPV NSATSITSGV DIEANYKFES SFGDWGFRLF STYLEERSFN STGFAEDEIK
ETGEQERPRW RHRFTTDYTY GDFSAVLTAN YRSSTVLSND WSPNQNNYND IPSYITFDLT
SRYNITDALQ VRAGILNMFD ETPPRQPGVY NQGAYYDILG QRITIGVNYT F
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