| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1619 |
|---|
| Symbol | |
|---|
| ID | 5079441 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 1843751 |
|---|
| End bp | 1844842 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640498758 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001183143 |
|---|
| Protein GI | 146292719 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4984] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGTAATT TATCATCTCA GGTATGTGAG TGGCTTGAAC AGGGATATAT CACTAAAGAG
CAGGCAAATC GCCTATATTG CGCTCTTTCG CCGCGACCAA GTGCAGCGAG CTGGAGAACC
CTCTTCAGCA CAATACTATT ATGGTTGGGG ACGTTTAGTT TTGTCAGCGG AGTGATATTT
TTCTTTGCCT ATAATTGGCA ATCCCTTGGC CGTTTTGCAA AATTTGCCCT AATAGAAGTG
GCAATATTGC TGACCATTTC CCTGTTTGTT TGGTTATATT ATCGTGCCGC TTGTCGAGTA
TCAGCTGCTT ATCCATATAA GTCTTCCCTC TTGGGGGTAA CAACTGCCAA TGCCATGCTG
TTCGGAGCCA GTATTTTAGT GGGAGGACTA TTAGCACTCG TTGGACAAAC CTATCAAACA
GGCGCCGATC CTTGGCAATT ATTCGCCTTG TGGGCAATTG TTATTTTACC TTTTGCTTGG
GTCGCAAGAT TTGATGCTTT ATGGTTATTG ATCGCCGGGT TATTGAATCT TAGTTTAGGG
TTGTTTTTTG ATACTTTTTC CCATTTTTGG GGAGACTTTT GGGATGAGCA AGCATTGCTA
TTCACCTTTG TCATCTTCAA TTTAGTTATC TATTACACCT TTGTTTTTTT AGACCGAAAA
GCGACAGGAA GCTGGCATGC TCCCCTTGTA GAGTATGCCT GTTCGATGTT TGCTATGGGA
TGTTTTACTT GGTTAATCAC TTGGCTGATT TTTGATGATG TGAGTGAACA TCATGGCTTT
TACACTGGGG TTATGTGCGG CTATTTTGCC CATCTTGTTA TTGGTTTCTT TATTTTCCGC
TATCGATTAC CACGTATATA TCCTTTAGCT TTAGGTGGTT TTAGTTTGAT TGCCGTGGTC
GGTGCATTAT GGGTAAAACT AATGTTTGAG GATAATGAGC CTATAGGTGG CTTCTTATTT
ATTGGCCTTT ATATCATTTT AGCCAGTACT GGTTTAAGCC TATGGTTGAG AAAACTAAAC
CGACTTTTTA ATACACAACC AGCCCAGTTA CTAAACCAAG CCATTATGGG AGAAGCCCAT
GGACAAAAAT AA
|
|---|
| Protein sequence | MSNLSSQVCE WLEQGYITKE QANRLYCALS PRPSAASWRT LFSTILLWLG TFSFVSGVIF
FFAYNWQSLG RFAKFALIEV AILLTISLFV WLYYRAACRV SAAYPYKSSL LGVTTANAML
FGASILVGGL LALVGQTYQT GADPWQLFAL WAIVILPFAW VARFDALWLL IAGLLNLSLG
LFFDTFSHFW GDFWDEQALL FTFVIFNLVI YYTFVFLDRK ATGSWHAPLV EYACSMFAMG
CFTWLITWLI FDDVSEHHGF YTGVMCGYFA HLVIGFFIFR YRLPRIYPLA LGGFSLIAVV
GALWVKLMFE DNEPIGGFLF IGLYIILAST GLSLWLRKLN RLFNTQPAQL LNQAIMGEAH
GQK
|
|---|
| |