Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1601 |
Symbol | |
ID | 5079417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1823742 |
End bp | 1824611 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640498734 |
Product | OmpA/MotB domain-containing protein |
Protein accession | YP_001183125 |
Protein GI | 146292701 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000019607 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGCGAA AACTGATATT AGTATCAATT TTATGCGTTC CTGCAACTGC AACGGCAGAG TTGCGCCATT ATGTGGCCTC GTTAAATAAT TCCCAATGGC GGGTTACTGA GAATTCTCCT ATCGTTTGTC GTCTTGAGCA TGATATTCCA TCCTATGGTA AAGCTATTTT TACCAGTGAG GCGGGTAAAC AACTGAATCT TAACTTCACG TTAGATATGT GGCTTAAACC GGACCAAGTG ACTCAAGCAC AGTTAATTAG TCGTTCACCC CAATGGCGTC CTGGTGTGGT ATCTAAAGAA ATCACTTCTT TACGCTATCA AAAATATTTT AACGGTGAAG TGCCTAAGCG TGCAGCTTGG TCAATGTTAG ACGAACTAAG CCGTGGTATG CAGCCCACAT TTTATTATGC GGATTGGTAT AACGAATCGA CTAAAATTGC AGTTGGGTTA TCCGCGGCTA ATTTTGGCCG TAAATATGCC GAGTTTAAGG CTTGTCTTGC TCACTTATTA CCTTATAGTT TTGAGGATAT AGCGTTCACC GTACTTAATT ATAATGAAGG CGGGACTGAC TTAACGCGTT TTTCTAAGCA ACAGCTAACA CGGGTGCAGG AATATCTGGC CTATGATCCT AATGTTGAAC TGGTGCTGGT GGATGCCTAT ACCGATAGTT ATGGTGGCCG TTCGGTTAAC CAAAGAGTGT CAGATAACCG CGCTGAGTCG GTGAAAGAGT TTTTCCTATC CAGTGGTATC CCTCAAGATC GTATTTTAAC GGTTGGTCAT GGTGAGCGGC GTCATGTAGC TTCAAATGAA GATATAGATG AAAGGGCCCG TAATCGCCGA GTCGTGATCA GGATAAGTAA ACCAATGTAG
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Protein sequence | MWRKLILVSI LCVPATATAE LRHYVASLNN SQWRVTENSP IVCRLEHDIP SYGKAIFTSE AGKQLNLNFT LDMWLKPDQV TQAQLISRSP QWRPGVVSKE ITSLRYQKYF NGEVPKRAAW SMLDELSRGM QPTFYYADWY NESTKIAVGL SAANFGRKYA EFKACLAHLL PYSFEDIAFT VLNYNEGGTD LTRFSKQQLT RVQEYLAYDP NVELVLVDAY TDSYGGRSVN QRVSDNRAES VKEFFLSSGI PQDRILTVGH GERRHVASNE DIDERARNRR VVIRISKPM
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