Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1369 |
Symbol | |
ID | 5080564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1556756 |
End bp | 1557511 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640498501 |
Product | putative hydrolase |
Protein accession | YP_001182896 |
Protein GI | 146292472 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG1387] Histidinol phosphatase and related hydrolases of the PHP family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.979942 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGTACC AAGTCGACAC TCATACACAT ACCGTGGCAT CGACCCATGC CTATAGCACG ATTCATGACT ATTTAGCGGT GGCGAAACAA AAGGGGATCC TTCTATTTGC AACGACAGAT CATGGTCCCG CTATGGCAGA TGCACCGCAT TTTTGGCATT TTGTGAATTT AAGAGTGCTG CCGCGTATGG TTGATGGTGT TGGGATCCTT CGTGGTATTG AGGCAAATAT TAAAAATATC GACGGCGAGA TTGATTTCTT TGGGGATTAT CTAAAGCAGC TTGATATCGT GCTTGCGGGA TTCCATGAGC CTGTCTATCC ACCCTCGGAT AAAGCAACCC ATACCGAAGC CATGATTAAT ACCATTAAGA GTGGCAAGGT CGATATCATT ACCCACCCAG GTAATCCTGC ATATCCTATT GATATTGATG CTGTTGCTCG TGCGGCAGCC GAATACGGTG TTGCCCTTGA AATCAATAAC TCTTCCTTTG AAGTGTCGCG TAAGGGCAGT GAAGCTAATT GCACCGCGAT TGCAAAAGCG GCGAAGGAGT TTGGCACCAT TCTTGTGATG GGCTCAGACT CCCATGTGGC TTTTAGCTTA GGGGGATTTG AACGAGCCCT AGCCATCATT GATGCCGCAG GATATCCCAA ATCTCAGCTA CTTAACCGTA GTCCATCTGT ATTGTTAGGC TTTCTAGCGC AACGCGGTCA TCACACTGTG GCTGATTTAC AGGCTTTATT TGATGAAGCG GTTTAA
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Protein sequence | MQYQVDTHTH TVASTHAYST IHDYLAVAKQ KGILLFATTD HGPAMADAPH FWHFVNLRVL PRMVDGVGIL RGIEANIKNI DGEIDFFGDY LKQLDIVLAG FHEPVYPPSD KATHTEAMIN TIKSGKVDII THPGNPAYPI DIDAVARAAA EYGVALEINN SSFEVSRKGS EANCTAIAKA AKEFGTILVM GSDSHVAFSL GGFERALAII DAAGYPKSQL LNRSPSVLLG FLAQRGHHTV ADLQALFDEA V
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