| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0812 |
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| Symbol | |
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| ID | 5081923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 903216 |
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| End bp | 904112 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640497938 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001182341 |
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| Protein GI | 146291917 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGATAA CATTAAGACA ATTGATGATC TTTAAAGCTA TACATTCTGA GAGGCAGATC
TCAAAAGCAG CAAAAGTGCT TCATATGTCA ACACCTGCTG TCAGTATGGC ACTTAAAGAA
TTAGAAAGTT CTTTAGGTTG CAGGTTATTT GAGCGGGTGT CGGGTGGTTT GGTTGTTAAT
GCCCATGGAG AAATTATATT ACCTTATGCA AATGAAATGC TCTGTAAAGG GAAGGAGTTG
GAAAATATAT TCTCATTTCC TGAGCACGGG ATTAAGGGAA CCTTAACTAT TGGAAGTAGT
AAAACTGCTG GTAATTATGT TTTATCTAGG AAAATTCCTT TATTTAAAAG CCAATATCCA
GATGTAAAAA TAAAATTGGT TGTTGATAAT AGTTTAGTTA TTGAGAAGAT GGTCTCTGAA
AGAGAGCTCG ATTTAGGTTT TATAGATGCC AAACCAGCGA GTAAAAATCT TATTTGTGAT
CACTGGTTGC AAGATAATCT TTGTATTGTG AGTGGTGCGA CTCATCCCGC TGCTAGTGAT
GTAAACACAA AAACGTGGCT TAGTGAACAA TTATGGATAT TCGACCATGA AGCATCGCTT
TCTCGAATTC GGGCAATACA GTTATTAAAA AGTTTAAATA TTCATGTCCG TGATGAAATT
TGCATGTCGA CAATTGGCGC GATTAAGAGA GCCATTGGGA CTGGTATAGG GTTGAGTGTA
CTGCCTATGC TAGCTATTGA TGCTGAATTA GCTCGGAAGG ATCTTACTTT ATTATCTGTT
GATGGATGGG ATTATAAACG GACTTATTGG TCAATTCAGC GAGAAGGTGA AGAATTGTCT
GCACTGAGCA TGAGTTTTTT AGCTTTTAGC AAGCAATCAT ATAATCATCT TAGCTAA
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| Protein sequence | MRITLRQLMI FKAIHSERQI SKAAKVLHMS TPAVSMALKE LESSLGCRLF ERVSGGLVVN
AHGEIILPYA NEMLCKGKEL ENIFSFPEHG IKGTLTIGSS KTAGNYVLSR KIPLFKSQYP
DVKIKLVVDN SLVIEKMVSE RELDLGFIDA KPASKNLICD HWLQDNLCIV SGATHPAASD
VNTKTWLSEQ LWIFDHEASL SRIRAIQLLK SLNIHVRDEI CMSTIGAIKR AIGTGIGLSV
LPMLAIDAEL ARKDLTLLSV DGWDYKRTYW SIQREGEELS ALSMSFLAFS KQSYNHLS
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