| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0399 |
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| Symbol | |
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| ID | 5081383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 432674 |
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| End bp | 433363 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640497519 |
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| Product | pseudouridine synthase Rlu family protein |
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| Protein accession | YP_001181930 |
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| Protein GI | 146291506 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR01621] pseudouridine synthase Rlu family protein, TIGR01621 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0325553 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACCAAA TCATAGCTGA TGAGGCTGAT TTTCTTGTTA TTTCAAAATT TCCTAAGGTG
CACTTTCATA GTCAAGATGG CACCGTGGGT GTAGTAGCAC AGGTTGAGCA AGATTTAGGG
ATTAAGCTTT TTGCTGTGCA TCGACTCGAT ACGCCCACAT CTGGTCTATT GATTCTGGCT
AAGAGTACTG CCGCGGCAAA ACAATTTACT GAGCTATTTA CCGCCCATAA AGTGCAGAAA
TATTACCTCG CCCTCGCAAA AGGTAAGCCG AAAAAGAAAC AAGGCTGGGT AATTGGTGAT
ATGGCAAAGT CACGCCGTAG TATGTTTAAG CTGTTGCGAA CTAAAGAAAA CCCTGCCATC
ACCCAATTTT TTTCAGTCAG TGTCGGAGAT GGATTGCGAC TTTATCTTCT CAAACCCCAT
TCGGGAAAAA CCCATCAATT GCGAGTGGCA TTGGCAAGCT TAGGTGTACC GATTTTAGGC
GATGAATTAT ATGGTGGTGC TGTGGCTGAC CGTTGCTATT TACACGCTTA TTGCCTGCAT
TTCCGCTATC AGGATGCGGT AACTGGTTGG CGGGATTATA CCTATCTGAA TATACCACAG
CAGGGCGAAG CTTTTCAGTT AGAGGCTGTA AGTGACGCGC TGGCTCTTTG GCATAAGCCA
GAGACTCTGG CATGGCCCTC TAAGGAGTAG
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| Protein sequence | MYQIIADEAD FLVISKFPKV HFHSQDGTVG VVAQVEQDLG IKLFAVHRLD TPTSGLLILA
KSTAAAKQFT ELFTAHKVQK YYLALAKGKP KKKQGWVIGD MAKSRRSMFK LLRTKENPAI
TQFFSVSVGD GLRLYLLKPH SGKTHQLRVA LASLGVPILG DELYGGAVAD RCYLHAYCLH
FRYQDAVTGW RDYTYLNIPQ QGEAFQLEAV SDALALWHKP ETLAWPSKE
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