| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0105 |
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| Symbol | |
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| ID | 5078880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 120441 |
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| End bp | 121487 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640497225 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001181640 |
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| Protein GI | 146291216 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGGTATT TAATAGTCAG TTTATGCCTG TTATGTTCAG CAGCATACGC AACAACACCA
GTCACGGTTG CCTTACCCCA ACTGGGCAGC GCCAACGAAC TGTTACCATT GAGTGGTTCT
ATTAAATCCG CACGAGTTGC CCGTCTATCA CCTCGTACCG ATGGGCTAGT AGCGCAAGTG
TTAGTTGATG CAGGGGCGAA GGTCAAAGCA GGGCAGCCAC TACTTAAGCT CGACGATACC
TTGGCAGTGC ACCAATTAAC CCAACGCCAA GCCGATATGA TGGCTGCTAC TACCCAACTG
ACAGAAAAAC AGCGCCTGTT AACCGAAGCG CAAACCTTAA GTTCCCAACA ACTTTTTCCA
GAAACTGAAC GAGCGATGCG TCAAGCAGCA CTCGCAGAGG CTAAAGCTAA CCTACAAAAT
GCCGAGGCTG CGCTGGCGTA CCAAAAAGAA GTGGTGGCTC GCCATCAACT CATTGCGCCT
TTTGCAGGCG TGATTTCAAG TAAACAAACT GAAACGGGTG AATGGGTCGA TGTTGGCACT
GAAATATTCA CTTTAGTATC CCAAGAACAA CTCTGGCTAG ATATCCAAGT ACCACAGGAA
ATGTTCCAAC AGATCACCAC AGCAACTCAA ATTGAGATAG CTGCCGATAT GCTGCCAACA
AAACAATTTA CTGGGCAAGT CAGCGCTCTC GTCCCCGTTA GCGATCACAA TGCCCGTAGC
TTCTTGATGC GATTAACCAT CCCCGATGCC AATTCACAGT TAATGCCTGG CACATCGGCA
ACGGCGACCT TTCACTTACA GCGCGAGCAA CACAGTTTAG TGATTCCGCA GGATGCCTTA
GTCCGCCACC CCGATGGCCA GTTTAGTGTC TTTACCGTAC AAAATAATAT TGCCCAACGT
CATAGTGTCA AAATTGGTCG TAGCAGCGCA ATTGGTATAG AGATCCTCAG CACACTACCT
GAAGGAGCCC CCGTGGTCAT TCGTGGTAAC GAAAATCTAC AGGATCAACA AGCCGTTTCT
GTCATTAATC ACAGTGTAGG AGGCTAG
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| Protein sequence | MRYLIVSLCL LCSAAYATTP VTVALPQLGS ANELLPLSGS IKSARVARLS PRTDGLVAQV
LVDAGAKVKA GQPLLKLDDT LAVHQLTQRQ ADMMAATTQL TEKQRLLTEA QTLSSQQLFP
ETERAMRQAA LAEAKANLQN AEAALAYQKE VVARHQLIAP FAGVISSKQT ETGEWVDVGT
EIFTLVSQEQ LWLDIQVPQE MFQQITTATQ IEIAADMLPT KQFTGQVSAL VPVSDHNARS
FLMRLTIPDA NSQLMPGTSA TATFHLQREQ HSLVIPQDAL VRHPDGQFSV FTVQNNIAQR
HSVKIGRSSA IGIEILSTLP EGAPVVIRGN ENLQDQQAVS VINHSVGG
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