Gene Spro_4920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4920 
Symbol 
ID5602408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009829 
Strand
Start bp9268 
End bp10365 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content51% 
IMG OID640930783 
Productpeptidase S14 ClpP 
Protein accessionYP_001471688 
Protein GI157362829 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID[TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP 


Plasmid Coverage information

Num covering plasmid clones75 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.558143 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATC AAACCGATGT GCCGTGGTGG GAAATTCGCA ATGCCACTGG CGAGGATGAA 
CCTACAGAAC TGCTGATTTA TGGCTATATC GGCGAGTGGG ACGATGTGAA CTCTCGTGAT
GTGGCCACGC AGCTGAAAGC CGTCACGTCA AAAGAGATCC ACGTCAAGAT TAACAGCTAC
GGTGGTTCTG TATTCACCGC GCAAGCCATT CTCAGCACCC TTAAACGCCA TACTGCAGCT
GTAACGGTAT TTATTGACGG GATCGCCGCC TCGGCTGCGA CCATCATCGC GATGGCAGGA
GAGCGGGTCG TAATTCCATC CAATGCCATG ATGATGATCC ATAACCCGCT AACGTGGGCA
GACGGAAATG CAGCAGACTT TCGTGAATAC GCCGACATGC TCGACAGAAT CCGCGACAGC
ATCATCGCTG CATACCAGAG CAAAACGTCA CTCACCCATG AAAAGCTGGT GGAGCTAATG
GACGCTGAAA CGTGGATGTC AGCTACCGAA GCTGTCGATC TAGGTTTTGC TGATGAAGTC
GAAGTGGCAT TGCGCGTTGC TGCGTCTATC GACAACGGCA TTCTCACCGT TAACGGCATG
TCATTCGACA GTAGCCGCTT TGCAAATATT CCCGCCGGAT TTGCAGTATC GAATACGGCA
CAGTCTCAAA AACCAACGCC TAAAAACACC CCGGCCCCGG CCACACCCGA AAAGGAGGAG
ATCGTGGATC TCGAAACCCT GAAAAATAAA TACCCTGAAT TGTATAACCA AATTAAAACC
GAAGGCGTCA GCGCGGGACA AACCGCCGAA CGTGCGCGAA TTAAAGCAAT TGAAGACCTG
GCCGGCAGTG ATCACAAAGA CCTTGTGAAC AAAGCCAAGT TTGACACCGG GGCATCAGCG
CCAGAACTGG CGGTGGAAAT CATGAACGCA GAAAAGGCGC GGAAAAAAGC CTATCTGGAC
AATCGCACTG ACGATGCCGA CGAACTGGAA AATGCCGCTG ACCCGAGCGA CCCGAAAAAC
AGCAAAGGGA AAAAGGAAAA AGAGAAAGAA ACGGTCACTA ATGCCATGAG CGCTGGGTTT
AACAAAAATC GTAAATAG
 
Protein sequence
MTDQTDVPWW EIRNATGEDE PTELLIYGYI GEWDDVNSRD VATQLKAVTS KEIHVKINSY 
GGSVFTAQAI LSTLKRHTAA VTVFIDGIAA SAATIIAMAG ERVVIPSNAM MMIHNPLTWA
DGNAADFREY ADMLDRIRDS IIAAYQSKTS LTHEKLVELM DAETWMSATE AVDLGFADEV
EVALRVAASI DNGILTVNGM SFDSSRFANI PAGFAVSNTA QSQKPTPKNT PAPATPEKEE
IVDLETLKNK YPELYNQIKT EGVSAGQTAE RARIKAIEDL AGSDHKDLVN KAKFDTGASA
PELAVEIMNA EKARKKAYLD NRTDDADELE NAADPSDPKN SKGKKEKEKE TVTNAMSAGF
NKNRK