| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4903 |
|---|
| Symbol | |
|---|
| ID | 5603310 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 5440560 |
|---|
| End bp | 5442131 |
|---|
| Gene Length | 1572 bp |
|---|
| Protein Length | 523 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640940479 |
|---|
| Product | regulatory ATPase RavA |
|---|
| Protein accession | YP_001481123 |
|---|
| Protein GI | 157373134 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0714] MoxR-like ATPases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.036099 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000827592 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGTTT ATCATCGGAT TATCCACCAA GATTGGCTAA CCCTCGGACA ACACGACAAT
AATATGGCGT CATCATCACT TCTTGCAGAA CGGATTTCCC GCCTCAGCAG CGCGCTGGAG
AGCGGTCTTT ATGAACGGCA GGAAGCCATT CGCCTGTGTT TGCTGGCGGC GCTCAGCGGT
GAAAGCGTGT TTCTGCTTGG CCCACCGGGC ATCGCCAAAA GCCTGATTGC CCGTCGGCTA
AAATTCGCCT TTCGCAGCGC GCGCTCGTTT GAATACCTGA TGACGCGCTT CTCAACGCCG
GAAGAAGTGT TCGGCCCATT GTCGATCCAG GCGTTAAAGG ACGAAGGCCG CTACCAACGT
CTGACCACCG GCTACCTGCC CGAAGCGGAA ATCGTGTTTC TGGATGAGAT CTGGAAGGCC
GGCCCGGCGA TCCTCAATAC CCTGCTGACG GCGATTAACG AACGCCGCTT CCGTAACGGT
AATAACGAAG AACCCATCCC ACTGCGGCTG CTGGTCACCG CCTCCAACGA ACTGCCGGAA
GCCGACAACA GTCTGGAAGC CTTGTATGAC CGCATGTTGA TACGCCTGTG GTTGGATAAA
GTGCAGGACA AACAGAATTT CCGCTCACTG CTGGTCAGCC GCCAGAACGA GAATGAAAAC
CCGGTGCCCG AAGCACTGAG CATCAGTGAC GAGGAATATC ACCAGTGGCA ATCGCAGATC
GACAAAATCA AACTGCCTGA GAATTGCTTT GAACTGATAT TCCAACTGCG CCAGCGGCTG
GATGCACTGG AAAGTGCCCC TTACGTTTCC GATCGTCGCT GGAAAAAAGC GCTGCGGCTG
TTGCAGGCCT GTGCTTTCTT CAGTGGTCGC GACACCGTGG CCCCAATCGA TCTGCTGCTG
CTGAAAGACT GCCTGTGGCA CGACCTCAGC TCGCTGAAAC TGCTGCAACA GCAAGTTGAG
CAGTTGCTGA ACGAGTCGGC CTATCAACAG CAAACCTTGC TGATCCAACT GCAACAGATC
CATACCCGCT GGCTACAGCA TCAGCAACAG CAGAGCGACA GCCAGGCTAT TACATTGGTA
AAAAAGGGCG GCATGTTCAG CAGAAAGCCC CAGTTTGCCC TGGCCACGCC ACTCGGTACC
GGCACCCTGA CCCTGTTGCT GCAAAAACCG CTGCAGCTGC ATGATATTCA GGTCAACCAT
CTGAGTATTG AAAACATCGC GCTGGAAAAC TGGCTGCAAA AAGGCGGCGA CGTGCGCGCC
AAACTGAACG GCATTGGCTT TGCTCAGCAG ATTGACCTGG AAGTGGACGA GCAACTGCAT
CTGACGGTAC TGGACGTCAG CCGCCAGCCC TCTTTACTGG CCCAGCCCGG CAAGCAGACC
AGCGGCACGC CGCAGGCAAT GCTGGACGAA ATGGATCAGC TTGCACAGCG CCTGGCAGAA
CAGCGTCGGT TATTCAGTCA GCATCAGCCC TGCCTGTTTA CCCCTGCCGC CAGGCTGGCA
AAAATTGAGT CCAGCCTGCT GCAGGTGGCG GAACAAATCA AACAGCAGCA CCAGCAAATG
CGCGGCCAGT AA
|
|---|
| Protein sequence | MVVYHRIIHQ DWLTLGQHDN NMASSSLLAE RISRLSSALE SGLYERQEAI RLCLLAALSG
ESVFLLGPPG IAKSLIARRL KFAFRSARSF EYLMTRFSTP EEVFGPLSIQ ALKDEGRYQR
LTTGYLPEAE IVFLDEIWKA GPAILNTLLT AINERRFRNG NNEEPIPLRL LVTASNELPE
ADNSLEALYD RMLIRLWLDK VQDKQNFRSL LVSRQNENEN PVPEALSISD EEYHQWQSQI
DKIKLPENCF ELIFQLRQRL DALESAPYVS DRRWKKALRL LQACAFFSGR DTVAPIDLLL
LKDCLWHDLS SLKLLQQQVE QLLNESAYQQ QTLLIQLQQI HTRWLQHQQQ QSDSQAITLV
KKGGMFSRKP QFALATPLGT GTLTLLLQKP LQLHDIQVNH LSIENIALEN WLQKGGDVRA
KLNGIGFAQQ IDLEVDEQLH LTVLDVSRQP SLLAQPGKQT SGTPQAMLDE MDQLAQRLAE
QRRLFSQHQP CLFTPAARLA KIESSLLQVA EQIKQQHQQM RGQ
|
|---|
| |