| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4253 |
|---|
| Symbol | |
|---|
| ID | 5606396 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 4715611 |
|---|
| End bp | 4716087 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640939813 |
|---|
| Product | putative transcriptional regulator, CadC |
|---|
| Protein accession | YP_001480475 |
|---|
| Protein GI | 157372486 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG3710] DNA-binding winged-HTH domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00298092 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACACTCG CAGAGAAAAA GTTGTCTTTG GTTGAAAACG ATTTTCTCGT TCTGAACAGT
AAAAGTAGCA CCCTAATTAT CAAGCCGAAA AATATAACCA TTCATCTTAC TGAACTGCAG
AGACGACTTT TTTGTATTTT GCTCAGTGGC GTAACCAAGA AGCAAGAAGT GATAGAGTCA
GTATGGGAAA ATAACCACGT TACTATCACT GACAACAACT ATCATCAATT AATATATCAA
TGCAGAACGT TGCTTTCCCG CCATGGTATA CCTCCCGAAG TCATCAAAAC CATCCCCCGA
TATGGCGTGA GATTCAACTA CTCGCCACTG GAAGAAGTCC TGAGCCAGCG CACCGTCAAG
TTGCCTAAAT GGCATAAGAA ACTTGCCGGA ATGCTCAGTG AGCGGCAAAG GTTGGTTCGC
AATGTTCTGC TTCTTGTCGT TATTAATTAT ATAGTTATTG CCAGTGTCGT GGTTTGA
|
|---|
| Protein sequence | MTLAEKKLSL VENDFLVLNS KSSTLIIKPK NITIHLTELQ RRLFCILLSG VTKKQEVIES
VWENNHVTIT DNNYHQLIYQ CRTLLSRHGI PPEVIKTIPR YGVRFNYSPL EEVLSQRTVK
LPKWHKKLAG MLSERQRLVR NVLLLVVINY IVIASVVV
|
|---|
| |