| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3877 |
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| Symbol | |
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| ID | 5605724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | - |
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| Start bp | 4292220 |
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| End bp | 4294916 |
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| Gene Length | 2697 bp |
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| Protein Length | 898 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640939437 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001480101 |
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| Protein GI | 157372112 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAATCG TCCCAACGTA TCAGCGTCAG TCTCAATCGC AGATGGCACC GGTTAACACT
CAGGATTTGA GGATCCCGAA AGATAGCGCC TTCACTGCGC TGGCAGATGT AGGCGCGAAA
GGGCTGGAGG TGTACCAGCA GGAGCGGCAA AAGGTCGATT TGGCTGATAT GCAGGACAAA
CTCAATCAGT TTTCCCAGTA TGCCGATGAC TTGTACAACA ACCCGCAGAA TGGCCTGATC
ACGTTGCAGG GAAAAAACGC TATCGGCCAA GGTGAAGCAC GAGCTGGTCA GATATCAAAT
AAAGCAGCTG AGATACGTGA ATCTTTGCCC GAGTACATGC GCCCGGCGTT TGATCAACAG
ATCCAGCCGC TTGGCCGTAG TTATGGCAAT AAATTTCGCC AGTATGATAT TGGGCAGAAG
CAACAGTATG AAGCTGGCCA ACAGCAAGGC GTATTGAGTA ATTTTTTAAC TCAGGCTAAT
GATCCTACAC AGTTTCAGCC AGCGGTGCTT TCTGCTCGAC AGGCGATAAT GGATTATGGT
GCTACTCATG GTCAGAGTCC GGAAGAGATA GAGGCAAATT GGCAGCAATG GTATCAAGGA
GCAGCTAATT CAGCATTTAG CACTGCCTAT ACCAATATGT ATCAGCAGAC CATGGGGCCG
GATGGGGTAA TTCCTGTAAC GGATGGTGCA AATAGCGATC AATTATTCTC TGCAATGATT
CGAGCAGAAA GTGGAGGCAA CCAATTCGAT AGTACTGGCT CGCCGCTTAT GTCCTCAAAA
GGAGCTGCTG GGATTGCTCA GGTAACAGAA TCAACAGGAC CCGAGGCTGC TCAGCTTGCT
GGCTTGTCGT GGGATAGGGA TAAGTGGCTG AATGACCCAC GCTACAACGC GACTATTGGG
CATGCCTATT TTCAGTCACA GATGAAACGT TATGACGGAG ATTCAGTGCT CGCTGTTGCC
GCATATAATG CAGGTCAAGG TCAGGTTAAC AAATGGATCG CGCAACTTGG TGATCCGCGC
AAAGGTGAGA TTTCATCTGC TGAATTCGTA GCCAAAATAC CATTTGAAGA AACACGGAAC
TATGTATCAA AAGTAGTTGG TTCTGCCCCA GGAATTCCGG TCAACGCTTC TATTACTGGA
TTGATGAATA CGCCATATTG GCAGGCTATG AGCCCTCAGA ACAAATCAGC CGCAATGGCT
AAAATTGCTG GGCTGTACGA CCTTCAAAAT TCAGCAGCAC GTTTGAGTTT ACAGAATAGA
ATGCAGGACG ATGAAACGCG TGTTGAGCTT GGTCAGCCAG TGTCTGCACC AATTACAGAG
CGAGAGTGGG TTTCCTCGAT GCCGCTCAGT GCCACGCCGC AAGAGCGAAT GCAATTACAG
CAGTCATACC AACGCTACCA GCAAACCCTT GCTATGCAGG CAGCCTATCA AACGATTGTG
CAAGGTGATG TACAGCAGGG CATGGCGGCA GTAAATGCTA TGAAGCCAGA TGTTAGCGAT
CCCGACTTTA CGTTCAAACA GCAGCGATAT GCGCAAGTGG CCAGTAAATA TTCTCAAGTG
CAGAAAGCCA GGGAAGATGA CCCGGGCACA TGGCTTCTTC AGAACTCTCC AGTTATCAAG
GATGCCTATA ACCAATTTTC TCAACGGCAG GTATCCGGCG AATACTTTGC CTCGCGTATT
CGGGCTGAGA AAGAGCGGCT GGGGATCCGT AGCAAAGACA TACTTCCGGC CGAGATGGTT
AATAGTGTTC TGCACCAGAT CGATAGTAGC AATGAGCAAA GCGTGGCGGC CGTACAAGCT
ATTGCCCAGA GCTATGGGAG CCAAGCACCG GCTGTAATCG CGCAATTGCA GGGGAAATCG
GGAAGTGCAC TCAGTGTTGT CATGTCTGTT GATAATGCCA ATGCAGCTAA TGCATTGTTC
CAAAACAGAA AGCTATCAAC AGATGAATTA AAAAAGGCGT CTGGCACACA ATCATCATCT
GTTGAAAGCG AATGGTCGGA TCAGTTTGCT GATTTTGGTG TGTCACTGGC ATCTCAAAGG
GGTGGACTAA AGGCATATTC AGACTTCAAT GAGCAAGGAA AGCGTCTTGC ATACATCTAT
GCATCGCGCG GCATGGATGG GGCGTCTGCT GCCAAGATGG CATTCAATCA GATTGCTGGC
GACCAATACG ACTTTGAAGG CGCTTGGCGC CTGCCAAAAT CATTAAACCT AAATGTTCGA
GACATTACTG ACGGAACAAA GAACTACCTG GAAAAACTAA AGCCAGAAGA TATAGATCCG
CAAGGTTTTG TGGGTGACTC TCGCTTACCC GCCGATGTTG GCAGAGCAAT GGCGTTGTCC
AGAATAAAAA ACAATGCTGA ATGGGTTACA AGTGAAGACG AAAAAGGGCT TTACCTCACA
GCAGATCGAA CCTATATCAA CGGGGCTGAT GGCAATCCAA TATTTGTCCC ATTCAAGGAA
CTTTCTCAGC TTGGAATTGC AGACAGAAGT TTCATTAATG CACGGCTCCA TGAATTAAAA
ACCCCGGCAA CTTTCACCCC TGCTGACGGA ATGGATAATC GAACTATCAA TAATGATTTG
TCAGATGTCT ACCGTAGCCT GCGTGGCGAA CCTGCGAGAG AGTTTACTGG CTACCAGGAA
CAGAATCCTG CGGAAAACAC ACTGGGTAAT GCTCTTCAGC ACAGGAGTGG TCAATGA
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| Protein sequence | MPIVPTYQRQ SQSQMAPVNT QDLRIPKDSA FTALADVGAK GLEVYQQERQ KVDLADMQDK
LNQFSQYADD LYNNPQNGLI TLQGKNAIGQ GEARAGQISN KAAEIRESLP EYMRPAFDQQ
IQPLGRSYGN KFRQYDIGQK QQYEAGQQQG VLSNFLTQAN DPTQFQPAVL SARQAIMDYG
ATHGQSPEEI EANWQQWYQG AANSAFSTAY TNMYQQTMGP DGVIPVTDGA NSDQLFSAMI
RAESGGNQFD STGSPLMSSK GAAGIAQVTE STGPEAAQLA GLSWDRDKWL NDPRYNATIG
HAYFQSQMKR YDGDSVLAVA AYNAGQGQVN KWIAQLGDPR KGEISSAEFV AKIPFEETRN
YVSKVVGSAP GIPVNASITG LMNTPYWQAM SPQNKSAAMA KIAGLYDLQN SAARLSLQNR
MQDDETRVEL GQPVSAPITE REWVSSMPLS ATPQERMQLQ QSYQRYQQTL AMQAAYQTIV
QGDVQQGMAA VNAMKPDVSD PDFTFKQQRY AQVASKYSQV QKAREDDPGT WLLQNSPVIK
DAYNQFSQRQ VSGEYFASRI RAEKERLGIR SKDILPAEMV NSVLHQIDSS NEQSVAAVQA
IAQSYGSQAP AVIAQLQGKS GSALSVVMSV DNANAANALF QNRKLSTDEL KKASGTQSSS
VESEWSDQFA DFGVSLASQR GGLKAYSDFN EQGKRLAYIY ASRGMDGASA AKMAFNQIAG
DQYDFEGAWR LPKSLNLNVR DITDGTKNYL EKLKPEDIDP QGFVGDSRLP ADVGRAMALS
RIKNNAEWVT SEDEKGLYLT ADRTYINGAD GNPIFVPFKE LSQLGIADRS FINARLHELK
TPATFTPADG MDNRTINNDL SDVYRSLRGE PAREFTGYQE QNPAENTLGN ALQHRSGQ
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